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transmembrane protein, putative (DUF761) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837664, updated on 18-Sep-2024

Summary

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Official Full Name
transmembrane protein, putative (DUF761)
Primary source
TAIR:AT1G11230
Locus tag
AT1G11230
See related
Araport:AT1G11230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T28P6.11; T28P6_11
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (3763268..3764483, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cotton fiber protein, putative (DUF761) Neighboring gene cotton fiber, putative (DUF761) Neighboring gene ribosomal RNA-processing protein Neighboring gene syntaxin of plants 125 Neighboring gene sugar transporter 1 Neighboring gene F-box and associated interaction domains-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001198032.1
NM_100995.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transmembrane protein, putative (DUF761)
NP_001184961.1
  • Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1).
NP_172589.1
  • Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 73 Blast hits to 72 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    3763268..3764483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100995.3 → NP_172589.1  transmembrane protein, putative (DUF761) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172589.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654E8V4, A0A7G2DSE3, A0ME64, Q1PFW9
    Conserved Domains (1) summary
    pfam14364
    Location:41 → 71
    DUF4408; Domain of unknown function (DUF4408)

  2. NM_001198032.1 → NP_001184961.1  transmembrane protein, putative (DUF761) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001184961.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W6I9, A0ME65, Q9SXA9
    Conserved Domains (1) summary
    pfam14364
    Location:41 → 71
    DUF4408; Domain of unknown function (DUF4408)
Nucleotide Protein
Heading Accession and Version

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