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yfiB hypothetical protein [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881938, updated on 11-Sep-2024

Summary

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Gene symbol
yfiB
Gene description
hypothetical protein
Locus tag
PA1119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (1212717..1213223, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene diguanylate cyclase Neighboring gene hypothetical protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1. Li S, et al. Biochem Biophys Res Commun, 2018 Dec 2. PMID 30404734
  2. Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1. Li S, et al. Sci Rep, 2015 Nov 23. PMID 26593397, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. extensive interactions between the N-terminal fragment of YfiB (residues 35-55) and YfiR, are reported.
    Title: Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1.
  2. YfiB is an outer membrane lipoprotein and presumed sensor protein that sequesters the repressor protein YfiR.
    Title: Structural insights into YfiR sequestering by YfiB in Pseudomonas aeruginosa PAO1.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
NP_249810.1
  • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    1212717..1213223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_249810.1 hypothetical protein PA1119 [Pseudomonas aeruginosa PAO1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2R3J593
    Conserved Domains (1) summary
    COG2885
    Location:17 → 165
    OmpA; Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9I4L6.1

Gene LinkOut

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Molecular Biology Databases
Research Materials