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ddpF putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946020, updated on 3-Dec-2024

Summary

Official Symbol
ddpF
Official Full Name
putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF
Primary source
ECOCYC:G6777
Locus tag
b1483
See related
ASAP:ABE-0004947
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1477; yddO
Summary
RpoS regulon. [More information is available at EcoGene: EG13786]. YddO is an ATP-binding component of a predicted peptide ABC transporter. [More information is available at EcoCyc: G6777].
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Genomic context

Sequence:
NC_000913.3 (1557112..1558038, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene biofilm-dependent modulation protein Neighboring gene osmotically inducible peroxiredoxin OsmC Neighboring gene putative D,D-dipeptide ABC transporter ATP-binding subunit DdpD Neighboring gene putative D,D-dipeptide ABC transporter membrane subunit DdpC Neighboring gene putative D,D-dipeptide ABC transporter membrane subunit DdpB Neighboring gene putative D,D-dipeptide ABC transporter periplasmic binding protein

Interactions

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding  
enables ATP hydrolysis activity  
Process Evidence Code Pubs
involved_in dipeptide transport PubMed 
involved_in peptide transport  
involved_in protein transport  
involved_in transmembrane transport  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing PubMed 
located_in membrane PubMed 
located_in plasma membrane  

General protein information

Preferred Names
putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1557112..1558038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416000.1 putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416000.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6PUW0
    Conserved Domains (2) summary
    COG1124
    Location:3253
    DppF; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]
    pfam08352
    Location:222287
    oligo_HPY; Oligopeptide/dipeptide transporter, C-terminal region
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