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yheO DNA-binding transcriptional regulator YheO [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947851, updated on 3-Dec-2024

Summary

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Official Symbol
yheO
Official Full Name
DNA-binding transcriptional regulator YheO
Primary source
ECOCYC:G7715
Locus tag
b3346
See related
ASAP:ABE-0010936
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3333
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Genomic context

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Sequence:
NC_000913.3 (3475718..3476440, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfurtransferase complex subunit TusB Neighboring gene sulfurtransferase complex subunit TusC Neighboring gene sulfurtransferase complex subunit TusD Neighboring gene peptidyl-prolyl cis-trans isomerase FkpA Neighboring gene protein SlyX

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
  2. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  3. Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions. Ikeuchi Y, et al. Mol Cell, 2006 Jan 6. PMID 16387657
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding transcriptional regulator YheO

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3475718..3476440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417805.4 DNA-binding transcriptional regulator YheO [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417805.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5C9AH44
    Conserved Domains (1) summary
    COG2964
    Location:19 → 235
    YheO; Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains [Transcription]
Nucleotide Protein
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