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xylH xylose ABC transporter membrane subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948083, updated on 17-Dec-2024

Summary

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Official Symbol
xylH
Official Full Name
xylose ABC transporter membrane subunit
Primary source
ECOCYC:EG12276
Locus tag
b3568
See related
ASAP:ABE-0011650
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3557
Summary
XylH is the integral membrane component of the XylFGH xylose ABC transporter. [More information is available at EcoCyc: EG12276].
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Genomic context

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Sequence:
NC_000913.3 (3733720..3734901)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene xylose isomerase Neighboring gene xylose ABC transporter periplasmic binding protein Neighboring gene xylose ABC transporter ATP binding subunit Neighboring gene DNA-binding transcriptional dual regulator XylR Neighboring gene putative glycoside hydrolase Bax Neighboring gene putative translational regulatory protein BaxL

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Growth on D-lyxose of a mutant strain of Escherichia coli K12 using a novel isomerase and enzymes related to D-xylase metabolism. Stevens FJ, et al. J Gen Microbiol, 1976 Dec. PMID 796410
  2. Utilization of D-ribose through D-xylose transporter. Song S, et al. FEMS Microbiol Lett, 1998 Jun 15. PMID 9673030
  3. Molecular genetics of a receptor protein for D-xylose, encoded by the gene xylF, in Escherichia coli. Sumiya M, et al. Recept Channels, 1995. PMID 8581399
  4. A family of homologous substrate-binding proteins with a broad range of substrate specificity and dissimilar biological functions. Wu LF, et al. Biochimie, 1995. PMID 8789466
  5. Reciprocal Regulation of l-Arabinose and d-Xylose Metabolism in Escherichia coli. Koirala S, et al. J Bacteriol, 2016 Feb 1. PMID 26527647, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within D-ribose transmembrane transport EXP
Inferred from Experiment
more info
 PubMed 
acts_upstream_of_or_within D-xylose metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in D-xylose transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
xylose ABC transporter membrane subunit
NP_418025.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3733720..3734901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418025.1 xylose ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418025.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2H4TTJ0
    Conserved Domains (1) summary
    COG4214
    Location:8 → 393
    XylH; ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism]
Nucleotide Protein
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