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yicL putative transporter YicL [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948176, updated on 3-Dec-2024

Summary

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Official Symbol
yicL
Official Full Name
putative transporter YicL
Primary source
ECOCYC:EG11688
Locus tag
b3660
See related
ASAP:ABE-0011962
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3650
Summary
YicL belongs to the EamA/RhaT transporter family, DMT superfamily. [More information is available at EcoGene: EG11688]. YicL inhibits biosynthesis of heme, possibly due to HemB inhibition . [More information is available at EcoCyc: EG11688].
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Genomic context

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Sequence:
NC_000913.3 (3838248..3839171)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative arabinose exporter Neighboring gene protein YicU Neighboring gene lipoprotein-28 Neighboring gene uncharacterized protein YicS

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of a cDNA from soybean and its homolog from Escherichia coli, which both complement the light sensitivity of Escherichia coli hemH mutant strain VS101. Kanjo N, et al. Genes Genet Syst, 2001 Oct. PMID 11817648
  2. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
  3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transporter YicL

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3838248..3839171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418116.1 putative transporter YicL [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418116.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9WYK5
    Conserved Domains (1) summary
    TIGR00950
    Location:18 → 287
    2A78; Carboxylate/Amino Acid/Amine Transporter
Nucleotide Protein
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