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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135175.2 → NP_001128647.1 protein NEDD1 isoform a
See identical proteins and their annotated locations for NP_001128647.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AA236927, AC007564, AC013417, AK290058, AL832466, BC027605
- Consensus CDS
-
CCDS44955.1
- UniProtKB/TrEMBL
-
A8K1Z3
- Related
- ENSP00000451211.1, ENST00000557644.5
- Conserved Domains (3) summary
-
- COG2319
Location:10 → 285
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:31 → 306
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:88 → 124
- 7WD40; WD40 repeat [structural motif]
-
NM_001135176.2 → NP_001128648.1 protein NEDD1 isoform b
See identical proteins and their annotated locations for NP_001128648.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses a downstream translation initiation codon, compared to variant 1, resulting in an isoform (b) that has a shorter N-terminus, compared to isoform a. Both variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AA236927, AC013417, AK290058, AK315821, AL832466
- Consensus CDS
-
CCDS9063.1
- UniProtKB/Swiss-Prot
- B0AZN0, B4E145, G3V3F1, Q8NA30, Q8NHV4
- UniProtKB/TrEMBL
-
A8K1Z3
- Related
- ENSP00000404978.2, ENST00000429527.6
- Conserved Domains (2) summary
-
- cd00200
Location:24 → 299
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:81 → 117
- 7WD40; WD40 repeat [structural motif]
-
NM_001135177.2 → NP_001128649.1 protein NEDD1 isoform c
See identical proteins and their annotated locations for NP_001128649.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and uses a downstream translation initiation codon, compared to variant 1, resulting in an isoform (c) that has a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AA236927, AC013417, AK290058, AK303656, AL832466
- Consensus CDS
-
CCDS44956.1
- UniProtKB/TrEMBL
-
A8K1Z3
- Related
- ENSP00000411307.2, ENST00000411739.6
- Conserved Domains (3) summary
-
- COG2319
Location:2 → 220
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:2 → 210
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:34 → 71
- 7WD40; WD40 repeat [structural motif]
-
NM_152905.4 → NP_690869.1 protein NEDD1 isoform b
See identical proteins and their annotated locations for NP_690869.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses a downstream translation initiation codon, compared to variant 1, resulting in an isoform (b) that has a shorter N-terminus, compared to isoform a. Both variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AA236927, AC013417, AK290058, AK315821, AL832466
- Consensus CDS
-
CCDS9063.1
- UniProtKB/Swiss-Prot
- B0AZN0, B4E145, G3V3F1, Q8NA30, Q8NHV4
- UniProtKB/TrEMBL
-
A8K1Z3
- Related
- ENSP00000266742.5, ENST00000266742.9
- Conserved Domains (2) summary
-
- cd00200
Location:24 → 299
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:81 → 117
- 7WD40; WD40 repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
96907257..96953780
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005268644.3 → XP_005268701.1 protein NEDD1 isoform X1
See identical proteins and their annotated locations for XP_005268701.1
- UniProtKB/TrEMBL
-
A8K1Z3
- Conserved Domains (3) summary
-
- COG2319
Location:10 → 285
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:31 → 306
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:88 → 124
- 7WD40; WD40 repeat [structural motif]
-
XM_006719237.5 → XP_006719300.1 protein NEDD1 isoform X2
See identical proteins and their annotated locations for XP_006719300.1
- UniProtKB/TrEMBL
-
A8K1Z3
- Conserved Domains (3) summary
-
- COG2319
Location:2 → 220
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:2 → 210
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:34 → 71
- 7WD40; WD40 repeat [structural motif]
-
XM_011537903.4 → XP_011536205.1 protein NEDD1 isoform X2
See identical proteins and their annotated locations for XP_011536205.1
- UniProtKB/TrEMBL
-
A8K1Z3
- Related
- ENSP00000407964.2, ENST00000457368.2
- Conserved Domains (3) summary
-
- COG2319
Location:2 → 220
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:2 → 210
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:34 → 71
- 7WD40; WD40 repeat [structural motif]
-
XM_047428288.1 → XP_047284244.1 protein NEDD1 isoform X3
-
XM_047428289.1 → XP_047284245.1 protein NEDD1 isoform X4
-
XM_047428290.1 → XP_047284246.1 protein NEDD1 isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
96881012..96927469
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054371081.1 → XP_054227056.1 protein NEDD1 isoform X1
- UniProtKB/TrEMBL
-
A8K1Z3
-
XM_054371082.1 → XP_054227057.1 protein NEDD1 isoform X2
- UniProtKB/TrEMBL
-
A8K1Z3
-
XM_054371083.1 → XP_054227058.1 protein NEDD1 isoform X2
- UniProtKB/TrEMBL
-
A8K1Z3
-
XM_054371084.1 → XP_054227059.1 protein NEDD1 isoform X3
-
XM_054371085.1 → XP_054227060.1 protein NEDD1 isoform X4
-
XM_054371086.1 → XP_054227061.1 protein NEDD1 isoform X5