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    vid21 NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539114, updated on 18-Sep-2024

    Summary

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    Official Symbol
    vid21
    Official Full Name
    NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1
    Primary source
    PomBase:SPCC1795.08c
    Locus tag
    SPOM_SPCC1795.08C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See vid21 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003421.2 (980971..984908)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein SVP26 Neighboring gene yapsin Yps1 Neighboring gene mitochondrial 37S ribosomal protein uS13m Neighboring gene P-factor pheromone Map2 Neighboring gene uridylate kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The NuA4 acetyltransferase and histone H4 acetylation promote replication recovery after topoisomerase I-poisoning. Noguchi C, et al. Epigenetics Chromatin, 2019 Apr 16. PMID 30992049, Free PMC Article
    2. The double-bromodomain proteins Bdf1 and Bdf2 modulate chromatin structure to regulate S-phase stress response in Schizosaccharomyces pombe. Garabedian MV, et al. Genetics, 2012 Feb. PMID 22095079, Free PMC Article
    3. Chaperone-mediated ordered assembly of the SAGA and NuA4 transcription co-activator complexes in yeast. Elías-Villalobos A, et al. Nat Commun, 2019 Nov 20. PMID 31748520, Free PMC Article
    4. Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex. Helmlinger D, et al. EMBO J, 2011 Jun 3. PMID 21642955, Free PMC Article
    5. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Shevchenko A, et al. Genome Biol, 2008. PMID 19040720, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA binding ISM
    Inferred from Sequence Model
    more info
    		  
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in DNA repair-dependent chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of NuA4 histone acetyltransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      980971..984908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023028.3 → NP_588036.2  NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588036.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59773
      Conserved Domains (1) summary
      smart00573
      Location:476 → 548
      HSA; domain in helicases and associated with SANT domains
    Nucleotide Protein
    Heading Accession and Version

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