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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029567.2 RefSeqGene
- Range
-
5002..120632
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_003872.3 → NP_003863.2 neuropilin-2 isoform 2 precursor
See identical proteins and their annotated locations for NP_003863.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), also known as NRP2a(17), lacks an alternate in-frame segment, compared to variant 1. This results in a shorter isoform (2), compared to isoform 1.
- Source sequence(s)
-
AC007362, AC007561, KF459587
- Consensus CDS
-
CCDS46496.1
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
- Related
- ENSP00000350432.5, ENST00000357785.10
- Conserved Domains (4) summary
-
- smart00137
Location:641 → 794
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
- pfam11980
Location:845 → 926
- DUF3481; C-terminal domain of neuropilin glycoprotein
-
NM_018534.4 → NP_061004.3 neuropilin-2 isoform 4 precursor
See identical proteins and their annotated locations for NP_061004.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (4), also known as NRP2b(5), lacks the last two 3' exons and includes an alternate 3' exon, compared to variant 1. This results in a shorter isoform (4) with a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC007362, KF459587
- Consensus CDS
-
CCDS2365.1
- UniProtKB/TrEMBL
-
Q7Z3T9
- Related
- ENSP00000272849.3, ENST00000272849.7
- Conserved Domains (6) summary
-
- cd06263
Location:646 → 793
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- pfam11980
Location:822 → 901
- DUF3481; Domain of unknown function (DUF3481)
- smart00137
Location:641 → 794
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- smart00231
Location:277 → 427
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
-
NM_201264.2 → NP_957716.1 neuropilin-2 isoform 6 precursor
See identical proteins and their annotated locations for NP_957716.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), also known as S9NRP2b, lacks several 3' exons and uses an alternate segment in the 3' coding region and 3' UTR, compared to variant 1. This results in a shorter, potentially soluble isoform (6) with a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC007362, KF459587
- Consensus CDS
-
CCDS46499.1
- UniProtKB/TrEMBL
-
A8K4G9
- Related
- ENSP00000387519.1, ENST00000417189.5
- Conserved Domains (3) summary
-
- smart00231
Location:277 → 427
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
-
NM_201266.2 → NP_957718.1 neuropilin-2 isoform 1 precursor
See identical proteins and their annotated locations for NP_957718.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), also known as NRP2a(22), represents the longest transcript, and encodes the longest isoform (1).
- Source sequence(s)
-
AC007362, AC007561, KF459587
- Consensus CDS
-
CCDS2364.1
- UniProtKB/Swiss-Prot
- A0A024R3W6, A0A024R412, E9PF66, O14820, O14821, O60462, Q53TQ4, Q53TS3, Q7LBX6, Q7LBX7, Q9H2D4, Q9H2D5, Q9H2E2, Q9H2E3, Q9H2E4, X5D2Q8
- UniProtKB/TrEMBL
-
Q7Z3T9
- Related
- ENSP00000353582.3, ENST00000360409.7
- Conserved Domains (4) summary
-
- smart00137
Location:641 → 794
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
- pfam11980
Location:850 → 931
- DUF3481; C-terminal domain of neuropilin glycoprotein
-
NM_201267.2 → NP_957719.1 neuropilin-2 isoform 5 precursor
See identical proteins and their annotated locations for NP_957719.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), also known as NRP2b(0), includes an alternate 3' sequence, compared to variant 1. This results in a shorter isoform (5) with a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC007362, KF459587
- Consensus CDS
-
CCDS46498.1
- UniProtKB/TrEMBL
-
X5D7M1
- Related
- ENSP00000349632.4, ENST00000357118.8
- Conserved Domains (6) summary
-
- cd06263
Location:646 → 793
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- pfam11980
Location:817 → 896
- DUF3481; Domain of unknown function (DUF3481)
- smart00137
Location:641 → 794
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- smart00231
Location:277 → 427
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
-
NM_201279.2 → NP_958436.1 neuropilin-2 isoform 3 precursor
See identical proteins and their annotated locations for NP_958436.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as NRP2a(0), lacks an in-frame segment and a following in-frame exon in the coding region, compared to variant 1. This results in a shorter isoform (3), compared to isoform 1.
- Source sequence(s)
-
AC007362, AC007561, KF459587
- Consensus CDS
-
CCDS46497.1
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
- Related
- ENSP00000407626.2, ENST00000412873.2
- Conserved Domains (6) summary
-
- cd06263
Location:646 → 793
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- pfam11980
Location:832 → 906
- DUF3481; Domain of unknown function (DUF3481)
- smart00137
Location:641 → 794
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- smart00231
Location:277 → 427
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
- cd00041
Location:28 → 141
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- cd00057
Location:280 → 426
- FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
205682501..205798131
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047446170.1 → XP_047302126.1 neuropilin-2 isoform X1
- UniProtKB/Swiss-Prot
- A0A024R3W6, A0A024R412, E9PF66, O14820, O14821, O60462, Q53TQ4, Q53TS3, Q7LBX6, Q7LBX7, Q9H2D4, Q9H2D5, Q9H2E2, Q9H2E3, Q9H2E4, X5D2Q8
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_047446172.1 → XP_047302128.1 neuropilin-2 isoform X2
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
-
XM_047446171.1 → XP_047302127.1 neuropilin-2 isoform X1
- UniProtKB/Swiss-Prot
- A0A024R3W6, A0A024R412, E9PF66, O14820, O14821, O60462, Q53TQ4, Q53TS3, Q7LBX6, Q7LBX7, Q9H2D4, Q9H2D5, Q9H2E2, Q9H2E3, Q9H2E4, X5D2Q8
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_047446173.1 → XP_047302129.1 neuropilin-2 isoform X2
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
-
XM_017005188.3 → XP_016860677.1 neuropilin-2 isoform X5
- UniProtKB/TrEMBL
-
X5D7M1
-
XM_047446174.1 → XP_047302130.1 neuropilin-2 isoform X3
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_047446175.1 → XP_047302131.1 neuropilin-2 isoform X4
- UniProtKB/TrEMBL
-
X5D7M1
-
XM_047446176.1 → XP_047302132.1 neuropilin-2 isoform X4
- UniProtKB/TrEMBL
-
X5D7M1
RNA
-
XR_007083522.1 RNA Sequence
-
XR_923057.4 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
206164595..206280478
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054344366.1 → XP_054200341.1 neuropilin-2 isoform X2
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
-
XM_054344363.1 → XP_054200338.1 neuropilin-2 isoform X1
- UniProtKB/Swiss-Prot
- A0A024R3W6, A0A024R412, E9PF66, O14820, O14821, O60462, Q53TQ4, Q53TS3, Q7LBX6, Q7LBX7, Q9H2D4, Q9H2D5, Q9H2E2, Q9H2E3, Q9H2E4, X5D2Q8
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_054344367.1 → XP_054200342.1 neuropilin-2 isoform X3
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_054344368.1 → XP_054200343.1 neuropilin-2 isoform X4
- UniProtKB/TrEMBL
-
X5D7M1
-
XM_054344364.1 → XP_054200339.1 neuropilin-2 isoform X1
- UniProtKB/Swiss-Prot
- A0A024R3W6, A0A024R412, E9PF66, O14820, O14821, O60462, Q53TQ4, Q53TS3, Q7LBX6, Q7LBX7, Q9H2D4, Q9H2D5, Q9H2E2, Q9H2E3, Q9H2E4, X5D2Q8
- UniProtKB/TrEMBL
-
Q7Z3T9
-
XM_054344365.1 → XP_054200340.1 neuropilin-2 isoform X2
- UniProtKB/TrEMBL
- B7ZL68, X5D7M1
-
XM_054344369.1 → XP_054200344.1 neuropilin-2 isoform X4
- UniProtKB/TrEMBL
-
X5D7M1
-
XM_054344370.1 → XP_054200345.1 neuropilin-2 isoform X5
- UniProtKB/TrEMBL
-
X5D7M1
RNA
-
XR_008486580.1 RNA Sequence
-
XR_008486581.1 RNA Sequence