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    • Showing Current items.

    exc-13 Excretory canal abnormal exc-13 [ Caenorhabditis elegans ]

    Gene ID: 179123, updated on 9-Dec-2024

    Summary

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    Official Symbol
    exc-13
    Official Full Name
    Excretory canal abnormal exc-13
    Primary source
    WormBase:WBGene00015393
    Locus tag
    CELE_C03G6.5
    See related
    AllianceGenome:WB:WBGene00015393
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See exc-13 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (7365251..7366060)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CYtochrome P450 family Neighboring gene CYtochrome P450 family Neighboring gene pseudo Neighboring gene Serpentine Receptor, class J

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Histone deacetylase HDA-4-mediated epigenetic regulation in space-flown C. elegans. Higashitani A, et al. NPJ Microgravity, 2021 Sep 1. PMID 34471121, Free PMC Article
    2. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Excretory canal abnormal exc-13
    NP_504881.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7365251..7366060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072480.6 → NP_504881.3  Excretory canal abnormal exc-13 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504881.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O01454
      Conserved Domains (1) summary
      pfam01579
      Location:33 → 194
      DUF19; Domain of unknown function (DUF19)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O01454.4

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