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    ydeS putative fimbrial protein YdeS [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946047, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydeS
    Official Full Name
    putative fimbrial protein YdeS
    Primary source
    ECOCYC:G6794
    Locus tag
    b1504
    See related
    ASAP:ABE-0005013
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1497
    Summary
    One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG13801].
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    Genomic context

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    Sequence:
    NC_000913.3 (1588309..1588839, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial adhesin protein YdeQ Neighboring gene putative fimbrial protein YdeR Neighboring gene fimbrial usher domain-containing protein YdeT Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell adhesion involved in single-species biofilm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in pilus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial protein YdeS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1588309..1588839 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416021.1 putative fimbrial protein YdeS [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416021.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6D0ID12
      Conserved Domains (1) summary
      COG3539
      Location:1 → 176
      FimA; Pilin (type 1 fimbria component protein) [Cell motility]
    Nucleotide Protein
    Heading Accession and Version

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