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    yfiB lipoprotein YfiB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947094, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yfiB
    Official Full Name
    lipoprotein YfiB
    Primary source
    ECOCYC:EG11152
    Locus tag
    b2605
    See related
    ASAP:ABE-0008572
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2602
    Summary
    OmpA homolog. [More information is available at EcoGene: EG11152]. Under the conditions examined, yfiB is not essential for viability of Escherichia coli . [More information is available at EcoCyc: EG11152].
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    Genomic context

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    Sequence:
    NC_000913.3 (2743625..2744107)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2799 domain-containing lipoprotein YfiL Neighboring gene DUF4154 domain-containing protein YfiR Neighboring gene diguanylate cyclase DgcN Neighboring gene 50S ribosomal subunit protein L19 Neighboring gene tRNA m(1)G37 methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The structural gene (trmD) for the tRNA(m1G)methyltransferase is part of a four polypeptide operon in Escherichia coli K-12. Byström AS, et al. Mol Gen Genet, 1982. PMID 6298574
    2. Functional analysis of the ffh-trmD region of the Escherichia coli chromosome by using reverse genetics. Persson BC, et al. J Bacteriol, 1995 Oct. PMID 7559342, Free PMC Article
    3. The nucleotide sequence of an Escherichia coli operon containing genes for the tRNA(m1G)methyltransferase, the ribosomal proteins S16 and L19 and a 21-K polypeptide. Byström AS, et al. EMBO J, 1983. PMID 6357787, Free PMC Article
    4. A comprehensive genetic characterization of bacterial motility. Girgis HS, et al. PLoS Genet, 2007 Sep. PMID 17941710, Free PMC Article
    5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in bacterial-type flagellum-dependent cell motility IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of bacterial-type flagellum stator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    lipoprotein YfiB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2743625..2744107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417096.1 lipoprotein YfiB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417096.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN5GST4
      Conserved Domains (1) summary
      PRK09967
      Location:1 → 160
      PRK09967; OmpA family protein
    Nucleotide Protein
    Heading Accession and Version

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