U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG31224 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42237, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG31224provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051224
    Locus tag
    Dmel_CG31224
    See related
    AllianceGenome:FB:FBgn0051224
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17796; CG7696; Dmel\CG31224; l(3)c00083
    Summary
    Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in organism. Orthologous to human FIZ1 (FLT3 interacting zinc finger 1); ZBTB44 (zinc finger and BTB domain containing 44); and ZNF618 (zinc finger protein 618). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG31224 in Genome Data Viewer
    Location:
    91B8-91B8; 3-64 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (18650121..18659309, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (14475843..14485031, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene qin Neighboring gene transfer RNA:Proline-TGG 1-5 Neighboring gene uncharacterized protein Neighboring gene Cleavage stimulation factor 64 kD subunit Neighboring gene Cleavage and polyadenylation specificity factor 73 Neighboring gene Golgi SNARE, 28 kDa

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. Thibault ST, et al. Nat Genet, 2004 Mar. PMID 14981521
    2. Homeostasis of glutamate neurotransmission is altered in Drosophila Inositol 1,4,5-trisphosphate receptor mutants. Nair S, et al. Invert Neurosci, 2007 Sep. PMID 17492321
    3. Specific transcriptional responses to juvenile hormone and ecdysone in Drosophila. Beckstead RB, et al. Insect Biochem Mol Biol, 2007 Jun. PMID 17517334, Free PMC Article
    4. A functional screen reveals an extensive layer of transcriptional and splicing control underlying RAS/MAPK signaling in Drosophila. Ashton-Beaucage D, et al. PLoS Biol, 2014 Mar. PMID 24643257, Free PMC Article
    5. Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). Hoskins RA, et al. Nucleic Acids Res, 2005 Dec 2. PMID 16326860, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG31224-PA
    CG31224-PB
    CG31224-PC
    lethal (3) c00083

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      18650121..18659309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300467.1 → NP_001287396.1  uncharacterized protein Dmel_CG31224, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287396.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VE54
      Conserved Domains (5) summary
      PHA00733
      Location:1527 → 1623
      PHA00733; hypothetical protein
      COG5048
      Location:1637 → 1780
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:1698 → 1718
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1554 → 1573
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:1506 → 1531
      zf-H2C2_2; Zinc-finger double domain

    2. NM_169826.2 → NP_732361.1  uncharacterized protein Dmel_CG31224, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732361.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VE54
      Related
      FBpp0083106
      Conserved Domains (5) summary
      PHA00733
      Location:1527 → 1623
      PHA00733; hypothetical protein
      COG5048
      Location:1637 → 1780
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:1698 → 1718
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1554 → 1573
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:1506 → 1531
      zf-H2C2_2; Zinc-finger double domain

    3. NM_001300468.1 → NP_001287397.1  uncharacterized protein Dmel_CG31224, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287397.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VE54
      Conserved Domains (5) summary
      PHA00733
      Location:1527 → 1623
      PHA00733; hypothetical protein
      COG5048
      Location:1637 → 1780
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:1698 → 1718
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1554 → 1573
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:1506 → 1531
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q86NX5 Q86NX5
    Q8IG87 Q8IG87
    Q8T3J8 Q8T3J8
    Q9VE54 Q9VE54

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools