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    gcv1 glycine decarboxylase T subunit gcv1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543195, updated on 18-Sep-2024

    Summary

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    Official Symbol
    gcv1
    Official Full Name
    glycine decarboxylase T subunit gcv1
    Primary source
    PomBase:SPAC31G5.14
    Locus tag
    SPOM_SPAC31G5.14
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    n313
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    Genomic context

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    See gcv1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (3012456..3014213)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FAM32A family protein Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene phosphatidylserine decarboxylase Psd3 Neighboring gene dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables aminomethyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transaminase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycine decarboxylation via glycine cleavage system ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of glycine cleavage complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in mitochondrial matrix IC
    Inferred by Curator
    more info
    		  
    is_active_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    glycine decarboxylase T subunit gcv1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3012456..3014213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019441.3 → NP_594015.1  glycine decarboxylase T subunit gcv1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594015.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14110, Q92364
      Conserved Domains (3) summary
      PLN02319
      Location:17 → 387
      PLN02319; aminomethyltransferase
      pfam01571
      Location:28 → 277
      GCV_T; Aminomethyltransferase folate-binding domain
      pfam08669
      Location:287 → 378
      GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
    Nucleotide Protein
    Heading Accession and Version

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