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    rrn10 RNA polymerase I upstream activation factor complex subunit Rrn10 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541835, updated on 14-Nov-2024

    Summary

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    Official Symbol
    rrn10
    Official Full Name
    RNA polymerase I upstream activation factor complex subunit Rrn10
    Primary source
    PomBase:SPAC22E12.08
    Locus tag
    SPOM_SPAC22E12.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rrn10 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (5033437..5034586)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene alpha-1,2-galactosyltransferase Gmh3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RanGAP Rna1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene kexin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the fission yeast ribosomal DNA binding factor: components share homology with Upstream Activating Factor and with SWI/SNF subunits. Liu M, et al. Nucleic Acids Res, 2002 Dec 15. PMID 12490702, Free PMC Article
    2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    contributes_to RNA polymerase I general transcription initiation factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase I promoter IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I upstream activating factor complex EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    RNA polymerase I upstream activation factor complex subunit Rrn10

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5033437..5034586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020263.3 → NP_594834.1  RNA polymerase I upstream activation factor complex subunit Rrn10 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594834.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10360
      Conserved Domains (1) summary
      pfam05234
      Location:3 → 97
      UAF_Rrn10; UAF complex subunit Rrn10
    Nucleotide Protein
    Heading Accession and Version

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