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    CG15208 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32022, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15208provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030247
    Locus tag
    Dmel_CG15208
    See related
    AllianceGenome:FB:FBgn0030247
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.64; Dmel\CG15208; lincRNA.977
    Summary
    Predicted to be involved in cytoskeleton organization. Human ortholog(s) of this gene implicated in axial spondylometaphyseal dysplasia. Orthologous to human CFAP410 (cilia and flagella associated protein 410). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15208 in Genome Data Viewer
    Location:
    9F8-9F8; 1-33 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10899965..10901811)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10793998..10795844)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44524 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene vermilion

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identical functional organization of nonpolytene and polytene chromosomes in Drosophila melanogaster. Vatolina TY, et al. PLoS One, 2011. PMID 22022482, Free PMC Article
    2. Associations between Variation in X Chromosome Male Reproductive Genes and Sperm Competitive Ability in Drosophila melanogaster. Greenspan L, et al. Int J Evol Biol, 2011. PMID 21716718, Free PMC Article
    3. Natural genetic variation in male reproductive genes contributes to nontransitivity of sperm competitive ability in Drosophila melanogaster. Zhang R, et al. Mol Ecol, 2013 Mar. PMID 23171073
    4. Characteristics of molecular-genetic organization of intercalary heterochromatin band 10A1-2 in X chromosome of Drosophila melanogaster. Babenko VN, et al. Dokl Biochem Biophys, 2009 Jan-Feb. PMID 19341102
    5. Sex-specific role of Drosophila melanogaster HP1 in regulating chromatin structure and gene transcription. Liu LP, et al. Nat Genet, 2005 Dec. PMID 16258543

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15208-PA
    CG15208-PB
    CG15208-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10899965..10901811
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298170.1 → NP_001285099.1  uncharacterized protein Dmel_CG15208, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285099.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZ54
      Conserved Domains (2) summary
      sd00035
      Location:44 → 65
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam12799
      Location:42 → 83
      LRR_4; Leucine Rich repeats (2 copies)

    2. NM_001298171.1 → NP_001285100.1  uncharacterized protein Dmel_CG15208, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285100.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZ54
      Conserved Domains (2) summary
      sd00035
      Location:44 → 65
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam12799
      Location:42 → 83
      LRR_4; Leucine Rich repeats (2 copies)

    3. NM_132436.3 → NP_572664.1  uncharacterized protein Dmel_CG15208, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572664.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZ54
      Related
      FBpp0073239
      Conserved Domains (2) summary
      sd00035
      Location:44 → 65
      LRR_NTF; leucine-rich repeat [structural motif]
      pfam12799
      Location:42 → 83
      LRR_4; Leucine Rich repeats (2 copies)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VZ54 Q9VZ54

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