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    CMS1 Cms1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 850689, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CMS1
    Official Full Name
    Cms1p
    Primary source
    SGD:S000003993
    Locus tag
    YLR003C
    See related
    AllianceGenome:SGD:S000003993; FungiDB:YLR003C; VEuPathDB:YLR003C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm and nucleus. Part of 90S preribosome. Orthologous to human CMSS1 (cms1 ribosomal small subunit homolog). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See CMS1 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (156855..157730, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Noc3p Neighboring gene Thi73p Neighboring gene TFIIH/NER complex subunit SSL1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of a novel gene, Cms1, can rescue the growth arrest of a Saccharomyces cerevisiae mcm10 suppressor. Wang JW, et al. Cell Res, 2001 Dec. PMID 11787774
    2. Pwp2 mediates UTP-B assembly via two structurally independent domains. Boissier F, et al. Sci Rep, 2017 Jun 9. PMID 28600509, Free PMC Article
    3. Interrelationships between yeast ribosomal protein assembly events and transient ribosome biogenesis factors interactions in early pre-ribosomes. Jakob S, et al. PLoS One, 2012. PMID 22431976, Free PMC Article
    4. The Efg1-Bud22 dimer associates with the U14 snoRNP contacting the 5' rRNA domain of an early 90S pre-ribosomal particle. Beine-Golovchuk O, et al. Nucleic Acids Res, 2024 Jan 11. PMID 38000371, Free PMC Article
    5. Molecular architecture of the 90S small subunit pre-ribosome. Sun Q, et al. Elife, 2017 Feb 28. PMID 28244370, Free PMC Article

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    part_of 90S preribosome HDA PubMed 
    located_in cytoplasm HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cms1p
    NP_013103.1
    • Putative subunit of the 90S preribosome processome complex; overexpression rescues supressor mutant of mcm10; null mutant is viable; relocalizes from nucleus to cytoplasm upon DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      156855..157730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181890.1 → NP_013103.1  TPA: Cms1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013103.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VY05, Q07897
      UniProtKB/TrEMBL
      A7A0Q8, B3LTG8, C7GPF5, C8ZCX5, G2WIJ7, N1P221
      Conserved Domains (1) summary
      cl28899
      Location:102 → 264
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q07897.1

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