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    CG12539 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32412, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG12539provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030586
    Locus tag
    Dmel_CG12539
    See related
    AllianceGenome:FB:FBgn0030586
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dm GMCiota2; Dmel\CG12539
    Summary
    Predicted to enable oxidoreductase activity. Predicted to be involved in ecdysteroid metabolic process. Orthologous to human CHDH (choline dehydrogenase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG12539 in Genome Data Viewer
    Location:
    12F5-12F5; 1-49 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14842617..14844757, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14736650..14738790, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Glutaredoxin 5 Neighboring gene Flotillin 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding  
    enables oxidoreductase activity  
    enables oxidoreductase activity PubMed 
    enables oxidoreductase activity, acting on CH-OH group of donors  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG12539-PA
    NP_572976.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      14842617..14844757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132748.3 → NP_572976.1  uncharacterized protein Dmel_CG12539 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572976.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXY8, Q9VY12
      Related
      FBpp0073804
      Conserved Domains (3) summary
      PRK02106
      Location:58 → 620
      PRK02106; choline dehydrogenase; Validated
      pfam05199
      Location:471 → 615
      GMC_oxred_C; GMC oxidoreductase
      cl21454
      Location:128 → 355
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
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