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    Gm14326 predicted gene 14326 [ Mus musculus (house mouse) ]

    Gene ID: 665211, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gm14326provided by MGI
    Official Full Name
    predicted gene 14326provided by MGI
    Primary source
    MGI:MGI:3709298
    See related
    Ensembl:ENSMUSG00000078862 AllianceGenome:MGI:3709298
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human ZNF442 (zinc finger protein 442). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in cerebellum adult (RPKM 4.2), cortex adult (RPKM 4.2) and 25 other tissues See more
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    Genomic context

    See Gm14326 in Genome Data Viewer
    Location:
    2 H4; 2 99.58 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (177577786..177599189, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (177935993..177957386, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein S8, pseudogene 5 Neighboring gene STARR-seq mESC enhancer starr_06695 Neighboring gene zinc finger protein 1003 Neighboring gene zinc finger protein 972 Neighboring gene STARR-seq mESC enhancer starr_06696 Neighboring gene predicted gene 14428 Neighboring gene STARR-seq mESC enhancer starr_06697 Neighboring gene STARR-seq mESC enhancer starr_06698 Neighboring gene predicted gene, 40030

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    novel KRAB box and zinc finger, C2H2 type domain containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001190302.2NP_001177231.1  novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 1

      See identical proteins and their annotated locations for NP_001177231.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      BX284639
      Consensus CDS
      CCDS50833.1
      UniProtKB/TrEMBL
      A2BFG5
      Related
      ENSMUSP00000104558.3, ENSMUST00000108930.9
      Conserved Domains (3) summary
      COG5048
      Location:129543
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:161181
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:344
      KRAB; KRAB box
    2. NM_001282028.1NP_001268957.1  novel KRAB box and zinc finger, C2H2 type domain containing protein isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an exon and contains an alternate 3' exon, resulting in a distinct 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
      Source sequence(s)
      BC079554
      Consensus CDS
      CCDS71210.1
      UniProtKB/TrEMBL
      A2BE16, A2BFG4
      Related
      ENSMUSP00000104560.2, ENSMUST00000108932.8
      Conserved Domains (2) summary
      smart00349
      Location:445
      KRAB; krueppel associated box
      pfam01352
      Location:443
      KRAB; KRAB box

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      177577786..177599189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030251946.2XP_030107806.1  novel KRAB box and zinc finger, C2H2 type domain containing protein isoform X1

      UniProtKB/TrEMBL
      A2BFG5
      Conserved Domains (3) summary
      COG5048
      Location:129543
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:161181
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:344
      KRAB; KRAB box

    RNA

    1. XR_003953684.2 RNA Sequence