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    ybbC PF15631 family protein YbbC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945115, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybbC
    Official Full Name
    PF15631 family protein YbbC
    Primary source
    ECOCYC:EG11769
    Locus tag
    b0498
    See related
    ASAP:ABE-0001726
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0492
    Summary
    Probable false positive lipoprotein prediction, Cys not conserved. ybbC and yhhH are paralogs. [More information is available at EcoGene: EG11769].
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    Genomic context

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    Sequence:
    NC_000913.3 (527581..527949)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter ATP-binding protein YbbA Neighboring gene putative ABC transporter membrane subunit YbbP Neighboring gene protein RhsD Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The RhsD-E subfamily of Escherichia coli K-12. Sadosky AB, et al. Nucleic Acids Res, 1991 Dec. PMID 1766878, Free PMC Article
    2. Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement. Jackson AP, et al. BMC Genomics, 2009 Dec 7. PMID 19968874, Free PMC Article
    3. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    4. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PF15631 family protein YbbC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      527581..527949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415031.1 PF15631 family protein YbbC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415031.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam15631
      Location:55 → 122
      Imm-NTF2-2; NTF2 fold immunity protein
    Nucleotide Protein
    Heading Accession and Version

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