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    srh-216 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 188622, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srh-216
    Official Full Name
    Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005426
    Locus tag
    CELE_T20B3.5
    See related
    AllianceGenome:WB:WBGene00005426
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srh-216 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (16825290..16827585, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Cullin-associated NEDD8-dissociated protein 1 Neighboring gene Choline/carnitine acyltransferase domain-containing protein Neighboring gene Neuropeptide-Like Protein Neighboring gene Serpentine Receptor, class H Neighboring gene Serpentine Receptor, class H

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing of C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements. Maroilley T, et al. Genome Res, 2023 Jan. PMID 36617680, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_507246.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      16825290..16827585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074845.3 → NP_507246.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507246.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XUN3
      Conserved Domains (1) summary
      pfam10318
      Location:14 → 310
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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