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    vps71 Swr1 complex histone chaperone module subunit Vps71 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540512, updated on 18-Sep-2024

    Summary

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    Official Symbol
    vps71
    Official Full Name
    Swr1 complex histone chaperone module subunit Vps71
    Primary source
    PomBase:SPBC29A3.05
    Locus tag
    SPOM_SPBC29A3.05
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    swc6
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    Genomic context

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    See vps71 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003423.3 (2046956..2047783)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 60S ribosomal protein eL8 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative CGI-48 family protein Neighboring gene ncRNA Neighboring gene Pre-mRNA branch site p14-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe. Kim HS, et al. Nat Struct Mol Biol, 2009 Dec. PMID 19915592, Free PMC Article
    2. Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs. Zofall M, et al. Nature, 2009 Sep 17. PMID 19693008, Free PMC Article
    3. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Shevchenko A, et al. Genome Biol, 2008. PMID 19040720, Free PMC Article
    4. Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species. Beltrao P, et al. PLoS Biol, 2009 Jun 16. PMID 19547744, Free PMC Article
    5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables nucleosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Swr1 complex histone chaperone module subunit Vps71

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2046956..2047783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021737.3 → NP_595833.1  Swr1 complex histone chaperone module subunit Vps71 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595833.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59669
      Conserved Domains (1) summary
      pfam04438
      Location:98 → 125
      zf-HIT; HIT zinc finger
    Nucleotide Protein
    Heading Accession and Version

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