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    yidE putative transport protein YidE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948193, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yidE
    Official Full Name
    putative transport protein YidE
    Primary source
    ECOCYC:EG11536
    Locus tag
    b3685
    See related
    ASAP:ABE-0012051
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3677; yibE
    Summary
    Predicted to be in the ST(3) structural class based on hydropathy profile (Lolkema, 2003), but is was not placed in the very similar IT superfamily in a study using phylogenetic methods (Prakash, 2003). [More information is available at EcoGene: EG11536]. Sequence analysis has suggested YidE is a membrane associated transporter. [More information is available at EcoCyc: EG11536].
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    Genomic context

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    Sequence:
    NC_000913.3 (3864612..3866273, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative PTS enzyme II component GlvB Neighboring gene putative PTS enzyme II component GlvC Neighboring gene putative DNA-binding transcriptional regulator YidP Neighboring gene small heat shock protein IbpB Neighboring gene small heat shock protein IbpA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple elements controlling adherence of enterohemorrhagic Escherichia coli O157:H7 to HeLa cells. Torres AG, et al. Infect Immun, 2003 Sep. PMID 12933841, Free PMC Article
    2. Two novel heat shock genes encoding proteins produced in response to heterologous protein expression in Escherichia coli. Allen SP, et al. J Bacteriol, 1992 Nov. PMID 1356969, Free PMC Article
    3. Domain structure and pore loops in the 2-hydroxycarboxylate transporter family. Lolkema JS. J Mol Microbiol Biotechnol, 2006. PMID 17114896
    4. Sequence and hydropathy profile analysis of two classes of secondary transporters. Lolkema JS, et al. Mol Membr Biol, 2005 May-Jun. PMID 16096261
    5. The ion transporter superfamily. Prakash S, et al. Biochim Biophys Acta, 2003 Dec 3. PMID 14643936

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in monoatomic cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transport protein YidE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3864612..3866273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418140.4 putative transport protein YidE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418140.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A776QYN7
      Conserved Domains (1) summary
      PRK03818
      Location:1 → 552
      PRK03818; putative transporter; Validated
    Nucleotide Protein
    Heading Accession and Version

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