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    rcnB periplasmic protein involved in nickel/cobalt export [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949080, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rcnB
    Official Full Name
    periplasmic protein involved in nickel/cobalt export
    Primary source
    ECOCYC:G7139
    Locus tag
    b2107
    See related
    ASAP:ABE-0006970
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2100; yohN
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    Genomic context

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    Sequence:
    NC_000913.3 (2186960..2187298)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor RcnR Neighboring gene Ni(2(+))/Co(2(+)) exporter Neighboring gene putative fimbrial adhesin YehA Neighboring gene putative fimbrial usher protein YehB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cu binding by the Escherichia coli metal-efflux accessory protein RcnB. Blériot C, et al. Metallomics, 2014 Aug. PMID 24658095
    2. Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli. Kozlowska J, et al. PLoS Pathog, 2014 May. PMID 24789011, Free PMC Article
    3. RcnB is a periplasmic protein essential for maintaining intracellular Ni and Co concentrations in Escherichia coli. Blériot C, et al. J Bacteriol, 2011 Aug. PMID 21665978, Free PMC Article
    4. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RcnB is essential for maintaining intracellular levels of Ni and Co.
      Title: RcnB is a periplasmic protein essential for maintaining intracellular Ni and Co concentrations in Escherichia coli.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables copper ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cobalt ion IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cobalt ion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to nickel cation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to nickel cation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to peptide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to peptide IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in outer membrane-bounded periplasmic space IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    periplasmic protein involved in nickel/cobalt export

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2186960..2187298
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416610.4 periplasmic protein involved in nickel/cobalt export [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416610.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376M5Y6
      Conserved Domains (1) summary
      COG5455
      Location:1 → 108
      RcnB; Periplasmic regulator RcnB of Ni and Co efflux [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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