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    kbaY tagatose-1,6-bisphosphate aldolase 1 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947644, updated on 17-Dec-2024

    Summary

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    Official Symbol
    kbaY
    Official Full Name
    tagatose-1,6-bisphosphate aldolase 1
    Primary source
    ECOCYC:EG12768
    Locus tag
    b3137
    See related
    ASAP:ABE-0010307
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    agaY; ECK3125; kba; yraC
    Summary
    Part of aga cluster. kbaY, gatY, fbaA and ydjI are paralogs. [More information is available at EcoGene: EG12768].
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    Genomic context

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    Sequence:
    NC_000913.3 (3283143..3284003)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative galactosamine-6-phosphate deaminase/isomerase Neighboring gene galactosamine-specific PTS enzyme IIB component Neighboring gene galactosamine-specific PTS enzyme IIC component Neighboring gene galactosamine-specific PTS enzyme IID component

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of mutations affecting the dissmilation of galactitol (dulcitol) in Escherichia coli K 12. Lengeler J. Mol Gen Genet, 1977 Mar 28. PMID 325390
    2. Sequence of the gat operon for galactitol utilization from a wild-type strain EC3132 of Escherichia coli. Nobelmann B, et al. Biochim Biophys Acta, 1995 May 17. PMID 7772602
    3. The genes and enzymes for the catabolism of galactitol, D-tagatose, and related carbohydrates in Klebsiella oxytoca M5a1 and other enteric bacteria display convergent evolution. Shakeri-Garakani A, et al. Mol Genet Genomics, 2004 Jul. PMID 15257457
    4. Temporal gene-expression in Escherichia coli K-12 biofilms. Domka J, et al. Environ Microbiol, 2007 Feb. PMID 17222132
    5. Structure of tagatose-1,6-bisphosphate aldolase. Insight into chiral discrimination, mechanism, and specificity of class II aldolases. Hall DR, et al. J Biol Chem, 2002 Jun 14. PMID 11940603

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables tagatose-bisphosphate aldolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables tagatose-bisphosphate aldolase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tagatose-bisphosphate aldolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tagatose-bisphosphate aldolase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in D-tagatose 6-phosphate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in D-tagatose 6-phosphate catabolic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein homotetramerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic complex NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tagatose-1,6-bisphosphate aldolase 1
    NP_417606.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3283143..3284003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417606.1 tagatose-1,6-bisphosphate aldolase 1 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417606.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9KIP8
      UniProtKB/TrEMBL
      A0A3L5H3Q5
      Conserved Domains (1) summary
      PRK12738
      Location:1 → 286
      kbaY; tagatose-bisphosphate aldolase subunit KbaY
    Nucleotide Protein
    Heading Accession and Version

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