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    yjgR DUF853 domain-containing protein YjgR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948978, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yjgR
    Official Full Name
    DUF853 domain-containing protein YjgR
    Primary source
    ECOCYC:G7890
    Locus tag
    b4263
    See related
    ASAP:ABE-0013963
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4256
    Summary
    AFMB Structural Genomics target Number 79 (http://afmb.cnrs-mrs.fr/article171.html). [More information is available at EcoGene: EG12537].
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    Genomic context

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    Sequence:
    NC_000913.3 (4488561..4490063, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YtgA Neighboring gene lipopolysaccharide transport system protein LptF Neighboring gene lipopolysaccharide transport system protein LptG Neighboring gene DNA-binding transcriptional dual regulator IdnR Neighboring gene L-idonate/5-ketogluconate/gluconate transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF853 domain-containing protein YjgR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4488561..4490063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418684.1 DUF853 domain-containing protein YjgR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418684.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1N381
      Conserved Domains (1) summary
      pfam05872
      Location:3 → 498
      DUF853; Bacterial protein of unknown function (DUF853)
    Nucleotide Protein
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