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    nfeR DNA-binding transcriptional repressor NfeR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947584, updated on 17-Dec-2024

    Summary

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    Official Symbol
    nfeR
    Official Full Name
    DNA-binding transcriptional repressor NfeR
    Primary source
    ECOCYC:G7594
    Locus tag
    b3071
    See related
    ASAP:ABE-0010084
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3061; yqjI
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    Genomic context

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    Sequence:
    NC_000913.3 (3216779..3217402)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-Ile Neighboring gene NADPH-dependent ferric-chelate reductase Neighboring gene aerotaxis receptor Neighboring gene putrescine aminotransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fur and the novel regulator YqjI control transcription of the ferric reductase gene yqjH in Escherichia coli. Wang S, et al. J Bacteriol, 2011 Jan. PMID 21097627, Free PMC Article
    2. Thermofluor-based high-throughput stability optimization of proteins for structural studies. Ericsson UB, et al. Anal Biochem, 2006 Oct 15. PMID 16962548
    3. Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Qin ZS, et al. Nat Biotechnol, 2003 Apr. PMID 12627170
    4. Factors influencing the identification of transcription factor binding sites by cross-species comparison. McCue LA, et al. Genome Res, 2002 Oct. PMID 12368244, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DNA-binding transcriptional repressor NfeR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3216779..3217402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417542.1 DNA-binding transcriptional repressor NfeR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417542.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FWC2, A0A418GCJ3
      Conserved Domains (1) summary
      COG1695
      Location:60 → 184
      PadR; DNA-binding transcriptional regulator, PadR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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