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    yheO DNA-binding transcriptional regulator YheO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947851, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yheO
    Official Full Name
    DNA-binding transcriptional regulator YheO
    Primary source
    ECOCYC:G7715
    Locus tag
    b3346
    See related
    ASAP:ABE-0010936
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3333
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    Genomic context

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    Sequence:
    NC_000913.3 (3475718..3476440, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfurtransferase complex subunit TusB Neighboring gene sulfurtransferase complex subunit TusC Neighboring gene sulfurtransferase complex subunit TusD Neighboring gene peptidyl-prolyl cis-trans isomerase FkpA Neighboring gene protein SlyX

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    2. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    3. Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positions. Ikeuchi Y, et al. Mol Cell, 2006 Jan 6. PMID 16387657
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding transcriptional regulator YheO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3475718..3476440 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417805.4 DNA-binding transcriptional regulator YheO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417805.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5C9AH44
      Conserved Domains (1) summary
      COG2964
      Location:19 → 235
      YheO; Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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