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    yfcS putative fimbrial chaperone YfcS [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946418, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfcS
    Official Full Name
    putative fimbrial chaperone YfcS
    Primary source
    ECOCYC:G7207
    Locus tag
    b2336
    See related
    ASAP:ABE-0007709
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2330
    Summary
    Overexpression causes abnormal biofilm architecture. [More information is available at EcoGene: EG14122]. YfcS is a hypothetical protein. [More information is available at EcoCyc: G7207].
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    Genomic context

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    Sequence:
    NC_000913.3 (2451584..2452336, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2544 domain-containing protein YfcO Neighboring gene putative fimbrial protein YfcP Neighboring gene putative fimbrial protein YfcQ Neighboring gene putative fimbrial protein YfcR Neighboring gene pseudo Neighboring gene putative fimbrial protein YfcV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. Tenorio E, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900028
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein folding chaperone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chaperone-mediated protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in outer membrane-bounded periplasmic space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in outer membrane-bounded periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial chaperone YfcS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2451584..2452336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416839.1 putative fimbrial chaperone YfcS [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416839.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A7ZPF2
      Conserved Domains (1) summary
      PRK15285
      Location:30 → 249
      PRK15285; fimbrial chaperone StfD
    Nucleotide Protein
    Heading Accession and Version

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