U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    torR DNA-binding transcriptional dual regulator TorR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946182, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    torR
    Official Full Name
    DNA-binding transcriptional dual regulator TorR
    Primary source
    ECOCYC:EG12615
    Locus tag
    b0995
    See related
    ASAP:ABE-0003362
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0986
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1057262..1057954, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative electron transport protein YccM Neighboring gene sensor histidine kinase TorS Neighboring gene periplasmic trimethylamine-N-oxide binding protein Neighboring gene cytochrome c menaquinol dehydrogenase TorC Neighboring gene trimethylamine N-oxide reductase 1 Neighboring gene trimethylamine-N-oxide reductase-specific chaperone

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The torR gene of Escherichia coli encodes a response regulator protein involved in the expression of the trimethylamine N-oxide reductase genes. Simon G, et al. J Bacteriol, 1995 Jan. PMID 7798146, Free PMC Article
    2. Binding of the TorR regulator to cis-acting direct repeats activates tor operon expression. Simon G, et al. Mol Microbiol, 1995 Sep. PMID 8596446
    3. [The effects of TorR protein on initiation of DNA replication in Escherichia coli]. Yao Y, et al. Yi Chuan, 2015 Mar. PMID 25787005
    4. The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli. Ansaldi M, et al. J Bacteriol, 2000 Feb. PMID 10648521, Free PMC Article
    5. Rapid dephosphorylation of the TorR response regulator by the TorS unorthodox sensor in Escherichia coli. Ansaldi M, et al. J Bacteriol, 2001 Apr. PMID 11274133, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. TorR/TorS Two-Component system resists extreme acid environment by regulating the key response factor RpoS in Escherichia coli.
      Title: TorR/TorS Two-Component system resists extreme acid environment by regulating the key response factor RpoS in Escherichia coli.
    2. The average number of replication origins per cell and doubling time in DeltatorS mutants were the same while the average number of oriCs in DeltatorR mutants was increased compared with wild-type cells.
      Title: [The effects of TorR protein on initiation of DNA replication in Escherichia coli].
    3. N-terminus verified by Edman degradation on complete protein
      Title: The torR gene of Escherichia coli encodes a response regulator protein involved in the expression of the trimethylamine N-oxide reductase genes.
    4. the X-ray crystal structures of the regulatory domains of response regulators TorR (1.8 A), Ca(2+)-bound KdpE (2.0 A), and Mg(2+)/BeF(3)(-)-bound KdpE (2.2 A), both members of the OmpR/ PhoB subfamily from Escherichia coli
      Title: A common dimerization interface in bacterial response regulators KdpE and TorR.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphorelay response regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phosphorelay response regulator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphorelay signal transduction system IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of protein-DNA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-binding transcriptional dual regulator TorR

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1057262..1057954 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415515.1 DNA-binding transcriptional dual regulator TorR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415515.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A831LT51
      Conserved Domains (1) summary
      PRK10766
      Location:1 → 220
      PRK10766; two-component system response regulator TorR
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.