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    xylH xylose ABC transporter membrane subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948083, updated on 17-Dec-2024

    Summary

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    Official Symbol
    xylH
    Official Full Name
    xylose ABC transporter membrane subunit
    Primary source
    ECOCYC:EG12276
    Locus tag
    b3568
    See related
    ASAP:ABE-0011650
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3557
    Summary
    XylH is the integral membrane component of the XylFGH xylose ABC transporter. [More information is available at EcoCyc: EG12276].
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    Genomic context

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    Sequence:
    NC_000913.3 (3733720..3734901)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene xylose isomerase Neighboring gene xylose ABC transporter periplasmic binding protein Neighboring gene xylose ABC transporter ATP binding subunit Neighboring gene DNA-binding transcriptional dual regulator XylR Neighboring gene putative glycoside hydrolase Bax Neighboring gene putative translational regulatory protein BaxL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Growth on D-lyxose of a mutant strain of Escherichia coli K12 using a novel isomerase and enzymes related to D-xylase metabolism. Stevens FJ, et al. J Gen Microbiol, 1976 Dec. PMID 796410
    2. Utilization of D-ribose through D-xylose transporter. Song S, et al. FEMS Microbiol Lett, 1998 Jun 15. PMID 9673030
    3. Molecular genetics of a receptor protein for D-xylose, encoded by the gene xylF, in Escherichia coli. Sumiya M, et al. Recept Channels, 1995. PMID 8581399
    4. A family of homologous substrate-binding proteins with a broad range of substrate specificity and dissimilar biological functions. Wu LF, et al. Biochimie, 1995. PMID 8789466
    5. Reciprocal Regulation of l-Arabinose and d-Xylose Metabolism in Escherichia coli. Koirala S, et al. J Bacteriol, 2016 Feb 1. PMID 26527647, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-ribose transmembrane transport EXP
    Inferred from Experiment
    more info
    		 PubMed 
    acts_upstream_of_or_within D-xylose metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in D-xylose transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylose ABC transporter membrane subunit
    NP_418025.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3733720..3734901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418025.1 xylose ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418025.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TTJ0
      Conserved Domains (1) summary
      COG4214
      Location:8 → 393
      XylH; ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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