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    EXOC6B exocyst complex component 6B [ Gallus gallus (chicken) ]

    Gene ID: 422955, updated on 17-Aug-2024

    Summary

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    Symbol
    EXOC6Bprovided by CGNC
    Full Name
    exocyst complex component 6Bprovided by CGNC
    Primary source
    CGNC:12030
    See related
    Ensembl:ENSGALG00010018410
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SEC15L2
    Orthologs
    human mouse all
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    Genomic context

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    See EXOC6B in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (89472271..89715777)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (89275131..89518955)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053335 Neighboring gene sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) Neighboring gene microRNA mir-12276 Neighboring gene uncharacterized LOC107053334 Neighboring gene cytochrome P450 family 26 subfamily B member 1 Neighboring gene uncharacterized LOC112532370

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 6B
    Names
    SEC15-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      89472271..89715777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004936290.5 → XP_004936347.2  exocyst complex component 6B isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z5R1, A0A8V0Z6C5
      Related
      ENSGALP00010026473.1, ENSGALT00010044480.1

    2. XM_015286064.4 → XP_015141550.2  exocyst complex component 6B isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    3. XM_025149797.3 → XP_025005565.2  exocyst complex component 6B isoform X4

      UniProtKB/TrEMBL
      A0A8V0YZP2, A0A8V0Z6C5
      Related
      ENSGALP00010026476.1, ENSGALT00010044483.1

    4. XM_015286066.4 → XP_015141552.1  exocyst complex component 6B isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      pfam04091
      Location:459 → 775
      Sec15; Exocyst complex subunit Sec15-like

    5. XM_015286065.4 → XP_015141551.2  exocyst complex component 6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z6B7, A0A8V0Z6C5
      Related
      ENSGALP00010026470.1, ENSGALT00010044477.1
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    6. XM_025149798.3 → XP_025005566.2  exocyst complex component 6B isoform X7

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    7. XM_025149799.3 → XP_025005567.1  exocyst complex component 6B isoform X9

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (2) summary
      pfam04091
      Location:435 → 751
      Sec15; Exocyst complex subunit Sec15-like
      cl25732
      Location:45 → 231
      SMC_N; RecF/RecN/SMC N terminal domain

    8. XM_040700116.2 → XP_040556050.1  exocyst complex component 6B isoform X10

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    9. XM_040700113.2 → XP_040556047.1  exocyst complex component 6B isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    10. XM_040700115.2 → XP_040556049.1  exocyst complex component 6B isoform X8

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    11. XM_040700117.2 → XP_040556051.1  exocyst complex component 6B isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z5Q7
      Related
      ENSGALP00010026468.1, ENSGALT00010044475.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      89275131..89518955
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040670080.2 → XP_040526014.1  exocyst complex component 6B isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    2. XM_040670081.2 → XP_040526015.1  exocyst complex component 6B isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    3. XM_040670082.2 → XP_040526016.1  exocyst complex component 6B isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    4. XM_040670084.2 → XP_040526018.1  exocyst complex component 6B isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    5. XM_040670083.2 → XP_040526017.1  exocyst complex component 6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    6. XM_040670086.2 → XP_040526020.1  exocyst complex component 6B isoform X7

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    7. XM_040670088.2 → XP_040526022.1  exocyst complex component 6B isoform X9

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    8. XM_040670089.2 → XP_040526023.1  exocyst complex component 6B isoform X10

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    9. XM_040670079.2 → XP_040526013.1  exocyst complex component 6B isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z6C5

    10. XM_040670087.2 → XP_040526021.1  exocyst complex component 6B isoform X8

      UniProtKB/TrEMBL
      A0A8V0Z6C5
      Conserved Domains (1) summary
      PRK03918
      Location:45 → 231
      PRK03918; DNA double-strand break repair ATPase Rad50

    11. XM_040670090.2 → XP_040526024.1  exocyst complex component 6B isoform X11

      UniProtKB/TrEMBL
      A0A8V0Z5Q7
    Nucleotide Protein Strain
    Heading Accession and Version

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