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    Dyro Dpt-YFP repressor by overexpression [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39271, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Dyroprovided by FlyBase
    Official Full Name
    Dpt-YFP repressor by overexpressionprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036152
    Locus tag
    Dmel_CG6175
    See related
    AllianceGenome:FB:FBgn0036152
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0257455.23; CG6175; Dmel\CG6175
    Summary
    Located in nucleus. Is expressed in embryonic/larval fat body. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Dyro in Genome Data Viewer
    Location:
    68C1-68C2; 3-36 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11287936..11295919, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11281036..11289019, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44720 Neighboring gene long non-coding RNA:CR45404 Neighboring gene long non-coding RNA:CR44361 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and Analysis of a Gene with Potential to Repress the IMD Pathway in Drosophila melanogaster. Kano N, et al. Zoolog Sci, 2019 Oct. PMID 33319966
    2. High rate of recent transposable element-induced adaptation in Drosophila melanogaster. González J, et al. PLoS Biol, 2008 Oct 21. PMID 18942889, Free PMC Article
    3. Identification of evolutionarily conserved regulators of muscle mitochondrial network organization. Katti P, et al. Nat Commun, 2022 Nov 4. PMID 36333356, Free PMC Article
    4. Genetic architecture of olfactory behavior in Drosophila melanogaster: differences and similarities across development. Lavagnino NJ, et al. Behav Genet, 2013 Jul. PMID 23563598, Free PMC Article
    5. Identification of novel genes that modify phenotypes induced by Alzheimer's beta-amyloid overexpression in Drosophila. Cao W, et al. Genetics, 2008 Mar. PMID 18245849, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Dpt-YFP repressor by overexpression
    Names
    CG6175-PB
    CG6175-PC
    CG6175-PD
    Dyro-PB
    Dyro-PC
    Dyro-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      11287936..11295919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274778.1 → NP_001261707.1  Dpt-YFP repressor by overexpression, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261707.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTH5, R4SGI7
      Conserved Domains (1) summary
      pfam10545
      Location:64 → 147
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

    2. NM_001274779.1 → NP_001261708.1  Dpt-YFP repressor by overexpression, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261708.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PC68, R4SGI7
      Conserved Domains (1) summary
      pfam10545
      Location:64 → 147
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

    3. NM_140200.2 → NP_648457.1  Dpt-YFP repressor by overexpression, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTH5, R4SGI7
      Related
      FBpp0075913
      Conserved Domains (1) summary
      pfam10545
      Location:64 → 147
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PC68 M9PC68
    Q8MS46 Q8MS46
    Q9VTH5 Q9VTH5

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