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    LOC419171 family with sequence similarity 83, member D [ Gallus gallus (chicken) ]

    Gene ID: 419171, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC419171provided by CGNC
    Full Name
    family with sequence similarity 83, member Dprovided by CGNC
    Primary source
    CGNC:93378
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    FAM83D
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    Genomic context

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    See LOC419171 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (4177293..4181454)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (3979027..3983187)

    Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 16B Neighboring gene family with sequence similarity 83, member D Neighboring gene DEAH-box helicase 35 Neighboring gene uncharacterized LOC101750167

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of cell cycle G1/S phase transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to mitotic spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of TOR signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitotic spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM83D-B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4177293..4181454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015296770.4 → XP_015152256.2  protein FAM83D-B isoform X1

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

    2. XM_015296772.4 → XP_015152258.2  protein FAM83D-B isoform X3

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

    3. XM_040651080.2 → XP_040507014.1  protein FAM83D-B isoform X2

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3979027..3983187
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040688703.2 → XP_040544637.1  protein FAM83D-B isoform X1

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

    2. XM_040688706.2 → XP_040544640.1  protein FAM83D-B isoform X3

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

    3. XM_040688705.2 → XP_040544639.1  protein FAM83D-B isoform X2

      Conserved Domains (1) summary
      cl15239
      Location:16 → 280
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
    Nucleotide Protein
    Heading Accession and Version

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