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    C06A8.6 U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174253, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C06A8.6
    Official Full Name
    U2A'/phosphoprotein 32 family A C-terminal domain-containing protein
    Primary source
    WormBase:WBGene00015516
    Locus tag
    CELE_C06A8.6
    See related
    AllianceGenome:WB:WBGene00015516
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in cytoplasm. Orthologous to human PPP1R7 (protein phosphatase 1 regulatory subunit 7). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C06A8.6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (7772499..7773914)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Serpentine Receptor, class H Neighboring gene Centrosomal protein CEP104 N-terminal domain-containing protein;DUF2040 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative methylenetetrahydrofolate reductase (NADPH) Neighboring gene snRNA-activating protein complex subunit 1 Neighboring gene Spindly-like protein spdl-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    U2A'/phosphoprotein 32 family A C-terminal domain-containing protein
    NP_495634.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7772499..7773914
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063233.4 → NP_495634.1  U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495634.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17692
      Conserved Domains (3) summary
      smart00446
      Location:293 → 310
      LRRcap; occurring C-terminal to leucine-rich repeats
      sd00033
      Location:56 → 77
      LRR_RI; leucine-rich repeat [structural motif]
      NF033189
      Location:2 → 279
      internalin_A; class 1 internalin InlA
    Nucleotide Protein
    Heading Accession and Version

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