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    CG11714 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772566, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11714provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036170
    Locus tag
    Dmel_CG11714
    See related
    AllianceGenome:FB:FBgn0036170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG33047; Dmel\CG11714
    Summary
    Is expressed in several structures, including amnioserosa; circulatory system primordium; embryonic/larval garland cell; larval foregut atrium; and yolk nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11714 in Genome Data Viewer
    Location:
    68C12-68C12; 3-36 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (11518798..11522713, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (11514113..11515813, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Salivary gland secretion 3 Neighboring gene alpha-L-fucosidase Neighboring gene Mob2 Neighboring gene mir-4968 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression study of an alpha-l-fucosidase gene in the Drosophilidae family. Pasini ME, et al. Gene, 2008 Aug 15. PMID 18556148
    2. Molecular characterization of embryonic gonads by gene expression profiling in Drosophila melanogaster. Shigenobu S, et al. Proc Natl Acad Sci U S A, 2006 Sep 12. PMID 16950879, Free PMC Article
    3. Prediction and verification of microRNA targets by MovingTargets, a highly adaptable prediction method. Burgler C, et al. BMC Genomics, 2005 Jun 8. PMID 15943864, Free PMC Article
    4. Genome-scale functional characterization of Drosophila developmental enhancers in vivo. Kvon EZ, et al. Nature, 2014 Aug 7. PMID 24896182
    5. Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders. Sechi S, et al. Cells, 2021 Sep 6. PMID 34571985, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11714-PA
    CG11714-PC
    CG11714-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      11518798..11522713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316464.1 → NP_001303393.1  uncharacterized protein Dmel_CG11714, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTJ5
      Conserved Domains (2) summary
      smart00225
      Location:29 → 133
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:27 → 131
      BTB; BTB/POZ domain

    2. NM_001274783.1 → NP_001261712.1  uncharacterized protein Dmel_CG11714, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261712.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PI13
      Conserved Domains (2) summary
      smart00225
      Location:17 → 121
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:15 → 119
      BTB; BTB/POZ domain

    3. NM_001031952.4 → NP_001027123.1  uncharacterized protein Dmel_CG11714, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027123.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VTJ5
      Conserved Domains (2) summary
      smart00225
      Location:29 → 133
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:27 → 131
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PI13 M9PI13
    Q9VTJ5 Q9VTJ5

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