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    yjtD putative tRNA/rRNA methyltransferase YjtD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948924, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yjtD
    Official Full Name
    putative tRNA/rRNA methyltransferase YjtD
    Primary source
    ECOCYC:EG12309
    Locus tag
    b4403
    See related
    ASAP:ABE-0014442
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4395; lasT
    Summary
    YjtD belongs to the SPOUT superfamily of methyltransferases . [More information is available at EcoCyc: EG12309].
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    Genomic context

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    Sequence:
    NC_000913.3 (4640942..4641628)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YjjY Neighboring gene protein YtjE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anaerobic activation of arcA transcription in Escherichia coli: roles of Fnr and ArcA. Compan I, et al. Mol Microbiol, 1994 Mar. PMID 8022271
    2. Multiple stressor-induced proteome responses of Escherichia coli BL21(DE3). Han KY, et al. J Proteome Res, 2008 May. PMID 18363324
    3. The yfhQ gene of Escherichia coli encodes a tRNA:Cm32/Um32 methyltransferase. Purta E, et al. BMC Mol Biol, 2006 Jul 18. PMID 16848900, Free PMC Article
    4. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    5. SPOUT: a class of methyltransferases that includes spoU and trmD RNA methylase superfamilies, and novel superfamilies of predicted prokaryotic RNA methylases. Anantharaman V, et al. J Mol Microbiol Biotechnol, 2002 Jan. PMID 11763972

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative tRNA/rRNA methyltransferase YjtD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4640942..4641628
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418820.1 putative tRNA/rRNA methyltransferase YjtD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418820.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N3DTA9
      Conserved Domains (1) summary
      PRK10433
      Location:1 → 228
      PRK10433; putative RNA methyltransferase; Provisional
    Nucleotide Protein
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