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    tdcR DNA-binding transcriptional activator TdcR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944907, updated on 3-Dec-2024

    Summary

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    Official Symbol
    tdcR
    Official Full Name
    DNA-binding transcriptional activator TdcR
    Primary source
    ECOCYC:EG10992
    Locus tag
    b3119
    See related
    ASAP:ABE-0010255
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3108
    Summary
    During anaerobiosis, TdcR participates in controlling several genes involved in transport and metabolism of threonine and serine . [More information is available at EcoCyc: EG10992].
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    Genomic context

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    Sequence:
    NC_000913.3 (3267380..3267598)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene catabolic threonine dehydratase Neighboring gene DNA-binding transcriptional activator TdcA Neighboring gene protein YhaB Neighboring gene uncharacterized protein YhaC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Escherichia coli K-12 mutation that inactivates biodegradative threonine dehydratase by transposon Tn5 insertion. Goss TJ, et al. J Bacteriol, 1984 Jun. PMID 6327641, Free PMC Article
    2. Identification and DNA sequence of tdcR, a positive regulatory gene of the tdc operon of Escherichia coli. Schweizer HP, et al. Mol Gen Genet, 1989 Sep. PMID 2573820
    3. Physical linkage and transcriptional orientation of the tdc operon on the Escherichia coli chromosome. Schweizer HP, et al. Mol Gen Genet, 1991 Aug. PMID 1886605
    4. Structure and function of enzymes involved in the anaerobic degradation of L-threonine to propionate. Simanshu DK, et al. J Biosci, 2007 Sep. PMID 17954980
    5. A novel mechanism controls anaerobic and catabolite regulation of the Escherichia coli tdc operon. Sawers G. Mol Microbiol, 2001 Mar. PMID 11251844

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding transcriptional activator TdcR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3267380..3267598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417589.4 DNA-binding transcriptional activator TdcR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417589.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GFH6
      Conserved Domains (1) summary
      PRK11424
      Location:1 → 72
      PRK11424; DNA-binding transcriptional activator TdcR; Provisional
    Nucleotide Protein
    Heading Accession and Version

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