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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001304965.2 → NP_001291894.1 POU domain, class 6, transcription factor 1 isoform 1
See identical proteins and their annotated locations for NP_001291894.1
Status: VALIDATED
- Source sequence(s)
-
AC123724
- Consensus CDS
-
CCDS79411.1
- UniProtKB/TrEMBL
- Q5U4D4, Q6X2S0
- Related
- ENSMUSP00000073504.7, ENSMUST00000073837.13
- Conserved Domains (2) summary
-
- pfam00046
Location:512 → 565
- Homeobox; Homeobox domain
- cl22952
Location:414 → 488
- Pou; Pou domain - N-terminal to homeobox domain
-
NM_001404294.1 → NP_001391223.1 POU domain, class 6, transcription factor 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC123724
- UniProtKB/TrEMBL
-
Q6X2S0
-
NM_001404295.1 → NP_001391224.1 POU domain, class 6, transcription factor 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC123724
- UniProtKB/Swiss-Prot
- Q07916, Q91XK3
-
NM_001404296.1 → NP_001391225.1 POU domain, class 6, transcription factor 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC123724
- UniProtKB/Swiss-Prot
- Q07916, Q91XK3
-
NM_001404297.1 → NP_001391226.1 POU domain, class 6, transcription factor 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC123724
- UniProtKB/Swiss-Prot
- Q07916, Q91XK3
- Related
- ENSMUSP00000145707.2, ENSMUST00000176271.9
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000081.7 Reference GRCm39 C57BL/6J
- Range
-
100473199..100497949 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030248418.2 → XP_030104278.1 POU domain, class 6, transcription factor 1 isoform X5
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:98 → 390
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:511 → 565
- Homeobox; Homeobox domain
- cl22952
Location:413 → 487
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_006520614.5 → XP_006520677.1 POU domain, class 6, transcription factor 1 isoform X8
- Conserved Domains (3) summary
-
- PRK12323
Location:46 → 263
- PRK12323; DNA polymerase III subunit gamma/tau
- pfam00046
Location:337 → 391
- Homeobox; Homeobox domain
- cl22952
Location:287 → 313
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_017316508.3 → XP_017171997.1 POU domain, class 6, transcription factor 1 isoform X6
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:58 → 378
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:478 → 532
- Homeobox; Homeobox domain
- cl22952
Location:380 → 454
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_017316509.2 → XP_017171998.1 POU domain, class 6, transcription factor 1 isoform X7
- Conserved Domains (1) summary
-
- PHA03247
Location:48 → 452
- PHA03247; large tegument protein UL36; Provisional
-
XM_030248417.2 → XP_030104277.1 POU domain, class 6, transcription factor 1 isoform X3
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:31 → 406
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:527 → 581
- Homeobox; Homeobox domain
- cl22952
Location:429 → 503
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_006520609.4 → XP_006520672.1 POU domain, class 6, transcription factor 1 isoform X2
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:50 → 424
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:545 → 599
- Homeobox; Homeobox domain
- cl22952
Location:447 → 521
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_030248416.1 → XP_030104276.1 POU domain, class 6, transcription factor 1 isoform X1
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:48 → 425
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:546 → 600
- Homeobox; Homeobox domain
- cl22952
Location:448 → 522
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_006520608.4 → XP_006520671.1 POU domain, class 6, transcription factor 1 isoform X1
- UniProtKB/TrEMBL
-
Q6X2S0
- Conserved Domains (3) summary
-
- PHA03247
Location:48 → 425
- PHA03247; large tegument protein UL36; Provisional
- pfam00046
Location:546 → 600
- Homeobox; Homeobox domain
- cl22952
Location:448 → 522
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_030248419.1 → XP_030104279.1 POU domain, class 6, transcription factor 1 isoform X9
- Conserved Domains (3) summary
-
- PRK14951
Location:41 → 158
- PRK14951; DNA polymerase III subunits gamma and tau; Provisional
- pfam00046
Location:267 → 321
- Homeobox; Homeobox domain
- cl22952
Location:169 → 243
- Pou; Pou domain - N-terminal to homeobox domain
-
XM_036159263.1 → XP_036015156.1 POU domain, class 6, transcription factor 1 isoform X10
- Conserved Domains (2) summary
-
- PHA03247
Location:58 → 295
- PHA03247; large tegument protein UL36; Provisional
- PRK07994
Location:170 → 272
- PRK07994; DNA polymerase III subunits gamma and tau; Validated
RNA
-
XR_004938810.1 RNA Sequence
- Related
-
ENSMUST00000176140.8
-
XR_004938809.1 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_010127.3: Suppressed sequence
- Description
- NM_010127.3: This RefSeq was removed because currently there is insufficient support for the transcript and protein.