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    Y53G8AR.6 SAP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175432, updated on 9-Dec-2024

    Summary

    Official Symbol
    Y53G8AR.6
    Official Full Name
    SAP domain-containing protein
    Primary source
    WormBase:WBGene00021813
    Locus tag
    CELE_Y53G8AR.6
    See related
    AllianceGenome:WB:WBGene00021813
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to be active in nucleus. Orthologous to human SARNP (SAP domain containing ribonucleoprotein). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Y53G8AR.6 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (3294743..3297248)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene HTH CENPB-type domain-containing protein Neighboring gene MFS domain-containing protein;Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene Mitochondrial ATP synthase regulatory component factor B Neighboring gene RING-type domain-containing protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    SAP domain-containing protein
    NP_497687.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3294743..3297248
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065286.6NP_497687.1  SAP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497687.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N3G0
      Conserved Domains (2) summary
      PLN03124
      Location:886
      PLN03124; poly [ADP-ribose] polymerase; Provisional
      pfam02037
      Location:1040
      SAP; SAP domain