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    yqgB acid stress response protein YqgB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947433, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yqgB
    Official Full Name
    acid stress response protein YqgB
    Primary source
    ECOCYC:G7521
    Locus tag
    b2939
    See related
    ASAP:ABE-0009638
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2934
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    Genomic context

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    Sequence:
    NC_000913.3 (3085920..3086051, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene agmatinase Neighboring gene biosynthetic arginine decarboxylase Neighboring gene protein YqgG Neighboring gene protein YqgC Neighboring gene DUF2684 domain-containing protein YqgD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global approaches for finding small RNA and small open reading frame functions. Wassarman KM, et al. J Bacteriol, 2010 Jan. PMID 19854892, Free PMC Article
    2. Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. Eydallin G, et al. FEBS Lett, 2007 Jun 26. PMID 17543954
    3. Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection. Hobbs EC, et al. J Bacteriol, 2010 Jan. PMID 19734312, Free PMC Article
    4. Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies. Hemm MR, et al. J Bacteriol, 2010 Jan. PMID 19734316, Free PMC Article
    5. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to acidic pH IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    acid stress response protein YqgB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3085920..3086051 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417414.2 acid stress response protein YqgB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417414.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0E0XW43, A0A0H3MKK5, A0A0H3Q0N9, A0A192CCH3, A0A1X3I2L5, A0A1X3IWN5, A0A1X3JDJ0, A0A836NB24, A0A8E0FNR5, A0A979H341, A0AAV3I2Q1, A7ZR62, B7LFK2, B7MMC8, B7MZN8, B7N7J2, C3SVA7, F4T2R5
      Conserved Domains (1) summary
      pfam11036
      Location:1 → 43
      YqgB; Virulence promoting factor
    Nucleotide Protein
    Heading Accession and Version

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