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    Tomm20l translocase of outer mitochondrial membrane 20-like [ Mus musculus (house mouse) ]

    Gene ID: 75266, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tomm20lprovided by MGI
    Official Full Name
    translocase of outer mitochondrial membrane 20-likeprovided by MGI
    Primary source
    MGI:MGI:1922516
    See related
    Ensembl:ENSMUSG00000021078 AllianceGenome:MGI:1922516
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930553D19Rik
    Summary
    Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix and tRNA import into mitochondrion. Predicted to be part of mitochondrial outer membrane translocase complex. Orthologous to human TOMM20L (translocase of outer mitochondrial membrane 20 like). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 27.3) and adrenal adult (RPKM 2.2) See more
    Orthologs
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    Genomic context

    See Tomm20l in Genome Data Viewer
    Location:
    12 C2; 12 29.39 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (71158202..71169996)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (71111428..71123222)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7144 Neighboring gene STARR-positive B cell enhancer ABC_E1442 Neighboring gene RIKEN cDNA 3110056K07 gene Neighboring gene STARR-positive B cell enhancer ABC_E11778 Neighboring gene proteasome subunit alpha 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:72116322-72116431 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:72116588-72116697 Neighboring gene STARR-seq mESC enhancer starr_32414 Neighboring gene AT-rich interaction domain 4A Neighboring gene STARR-positive B cell enhancer ABC_E7145 Neighboring gene STARR-seq mESC enhancer starr_32415 Neighboring gene RIKEN cDNA 2700049A03 gene Neighboring gene predicted gene, 32906 Neighboring gene STARR-positive B cell enhancer ABC_E918 Neighboring gene STARR-positive B cell enhancer ABC_E10758 Neighboring gene translocase of inner mitochondrial membrane 9 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene Neighboring gene predicted gene 7959

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1)  1 citation
    • Targeted (2) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables mitochondrion targeting sequence binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to protein transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein import into mitochondrial matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein targeting IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tRNA import into mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial outer membrane translocase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial outer membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    TOMM20-like protein 1
    Names
    translocase of outer mitochondrial membrane 20 homolog-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029227.1NP_083503.1  TOMM20-like protein 1

      See identical proteins and their annotated locations for NP_083503.1

      Status: VALIDATED

      Source sequence(s)
      AC112794, AK016101
      Consensus CDS
      CCDS49080.1
      UniProtKB/Swiss-Prot
      Q9D4V6
      Related
      ENSMUSP00000021482.5, ENSMUST00000021482.6
      Conserved Domains (1) summary
      pfam02064
      Location:24127
      MAS20; MAS20 protein import receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      71158202..71169996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)