U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    STB4 Stb4p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855033, updated on 9-Dec-2024

    Summary

    Official Symbol
    STB4
    Official Full Name
    Stb4p
    Primary source
    SGD:S000004621
    Locus tag
    YMR019W
    See related
    AllianceGenome:SGD:S000004621; FungiDB:YMR019W; VEuPathDB:YMR019W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables sequence-specific DNA binding activity. Predicted to be involved in DNA-templated transcription and regulation of transcription by RNA polymerase II. Located in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See STB4 in Genome Data Viewer
    Location:
    chromosome: XIII
    Exon count:
    1
    Sequence:
    Chromosome: XIII; NC_001145.3 (312156..315005)

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Spo20p Neighboring gene Pex9p Neighboring gene polyamine oxidase Neighboring gene Mac1p

    Interactions

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding  
    enables DNA binding PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific  
    enables metal ion binding  
    enables sequence-specific DNA binding PubMed 
    enables zinc ion binding  
    enables zinc ion binding PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion PubMed 
    located_in nucleus  
    located_in nucleus PubMed 

    General protein information

    Preferred Names
    Stb4p
    NP_013732.1
    • Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3 Reference assembly

      Range
      312156..315005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182515.1 → NP_013732.1  TPA: Stb4p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013732.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZJ3, P50104
      UniProtKB/TrEMBL
      C7GLA0
      Conserved Domains (2) summary
      smart00066
      Location:82 → 122
      GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
      pfam04082
      Location:401 → 661
      Fungal_trans; Fungal specific transcription factor domain
    External link. Please review our privacy policy.