U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ORC6 origin recognition complex subunit 6 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856518, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ORC6
    Official Full Name
    origin recognition complex subunit 6
    Primary source
    SGD:S000001160
    Locus tag
    YHR118C
    See related
    AllianceGenome:SGD:S000001160; FungiDB:YHR118C; VEuPathDB:YHR118C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables DNA replication origin binding activity. Involved in DNA replication initiation; pre-replicative complex assembly involved in nuclear cell cycle DNA replication; and silent mating-type cassette heterochromatin formation. Part of DNA replication preinitiation complex; nuclear origin of replication recognition complex; and nuclear pre-replicative complex. Used to study Meier-Gorlin syndrome. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ORC6 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (344321..345628, complement)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Cox23p Neighboring gene protein channel TOM71 Neighboring gene histone methyltransferase SET1 Neighboring gene mismatch repair ATPase MSH1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. An essential role for Orc6 in DNA replication through maintenance of pre-replicative complexes. Semple JW, et al. EMBO J, 2006 Nov 1. PMID 17053779, Free PMC Article
    2. Isolation of ORC6, a component of the yeast origin recognition complex by a one-hybrid system. Li JJ, et al. Science, 1993 Dec 17. PMID 8266075
    3. Two-faced cyclins with eyes on the targets. Archambault V, et al. Cell Cycle, 2005 Jan. PMID 15611618
    4. Linkage between phosphorylation of the origin recognition complex and its ATP binding activity in Saccharomyces cerevisiae. Makise M, et al. J Biol Chem, 2009 Feb 6. PMID 19068484
    5. Break dosage, cell cycle stage and DNA replication influence DNA double strand break response. Zierhut C, et al. EMBO J, 2008 Jul 9. PMID 18511906, Free PMC Article

    See all (110) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The Orc6 RXL/cyclin-binding motif plays a positive role in the initial recruitment of Cdt1/Mcm2-7 to the origin, suggesting that this motif is critical for the switch between active and inhibited ORC function at the G1-to-S-phase transition.
      Title: CDK prevents Mcm2-7 helicase loading by inhibiting Cdt1 interaction with Orc6.
    2. In this study, yeast two-hybrid analysis was used to examine the interaction between Cdt1p and every ORC subunit; potent interaction with Orc6p, and weaker interaction with Orc2p and Orc5p was observed.
      Title: Interaction between ORC and Cdt1p of Saccharomyces cerevisiae.
    3. Orc6 is required for dynamic recruitment of Cdt1 during repeated loading of DNA helicases.
      Title: Orc6 is required for dynamic recruitment of Cdt1 during repeated Mcm2-7 loading.
    4. Orc6 was required for entry into S phase after pre-replicative complexes formation
      Title: An essential role for Orc6 in DNA replication through maintenance of pre-replicative complexes.
    5. The 'hydrophobic patch' (HP) of the Saccharomyces cerevisiae S-phase cyclin Clb5 facilitates its interaction with Orc6 (via its Cy or RXL motif), providing a mechanism that helps prevent rereplication from individual origins.
      Title: Two-faced cyclins with eyes on the targets.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA replication origin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA replication initiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pre-replicative complex assembly involved in nuclear cell cycle DNA replication IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in silent mating-type cassette heterochromatin formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DNA replication preinitiation complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nuclear origin of replication recognition complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of nuclear origin of replication recognition complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of nuclear origin of replication recognition complex IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    part_of nuclear pre-replicative complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    origin recognition complex subunit 6
    NP_011986.1
    • Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; phosphorylated by Cdc28p; mutation in the human Orc6p is linked to Meier-Gorlin syndrome

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      344321..345628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179248.1 → NP_011986.1  TPA: origin recognition complex subunit 6 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011986.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DL68, P38826
      UniProtKB/TrEMBL
      A6ZT26, B3LSN3, C8Z9R1, G2WFJ2, N1P9F4
      Conserved Domains (1) summary
      pfam05460
      Location:22 → 416
      ORC6; Origin recognition complex subunit 6 (ORC6)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38826.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools