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    swc2 Swr1 complex histone chaperone module subunit Swc2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541337, updated on 18-Sep-2024

    Summary

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    Official Symbol
    swc2
    Official Full Name
    Swr1 complex histone chaperone module subunit Swc2
    Primary source
    PomBase:SPBP35G2.13c
    Locus tag
    SPOM_SPBP35G2.13C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See swc2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (990227..991453, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein Nbr1 Neighboring gene ncRNA Neighboring gene subfamily NudF ADP-ribose diphosphatase Ysa1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Schizosaccharomyces pombe JmjC-protein, Msc1, prevents H2A.Z localization in centromeric and subtelomeric chromatin domains. Buchanan L, et al. PLoS Genet, 2009 Nov. PMID 19911051, Free PMC Article
    2. Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast. Hou H, et al. J Biol Chem, 2010 Jan 15. PMID 19910462, Free PMC Article
    3. An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe. Kim HS, et al. Nat Struct Mol Biol, 2009 Dec. PMID 19915592, Free PMC Article
    4. Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs. Zofall M, et al. Nature, 2009 Sep 17. PMID 19693008, Free PMC Article
    5. The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast. Fontebasso Y, et al. DNA Repair (Amst), 2013 Dec. PMID 24192486, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IC
    Inferred by Curator
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleolus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Swr1 complex histone chaperone module subunit Swc2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      990227..991453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021295.3 → NP_595388.1  Swr1 complex histone chaperone module subunit Swc2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595388.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P790
      Conserved Domains (2) summary
      smart00993
      Location:271 → 298
      YL1_C; YL1 nuclear protein C-terminal domain
      pfam05764
      Location:9 → 231
      YL1; YL1 nuclear protein
    Nucleotide Protein
    Heading Accession and Version

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