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    ZNF280D zinc finger protein 280D [ Gallus gallus (chicken) ]

    Gene ID: 415593, updated on 17-Aug-2024

    Summary

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    Symbol
    ZNF280Dprovided by CGNC
    Full Name
    zinc finger protein 280Dprovided by CGNC
    Primary source
    CGNC:50022
    See related
    Ensembl:ENSGALG00010023201
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SUHW4
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF280D in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (7610968..7657292)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (7483914..7530213)

    Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene myocardial zonula adherens protein Neighboring gene cingulin like 1 Neighboring gene transcription factor 12 Neighboring gene testis expressed 9 Neighboring gene meiosis specific nuclear structural 1 Neighboring gene regulatory factor X7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 280D
    Names
    suppressor of hairy wing homolog 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7610968..7657292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040706848.2 → XP_040562782.1  zinc finger protein 280D isoform X3

      Conserved Domains (2) summary
      PRK03427
      Location:63 → 172
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:355 → 376
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_004943784.5 → XP_004943841.3  zinc finger protein 280D isoform X4

      Conserved Domains (4) summary
      PRK03427
      Location:78 → 187
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:33 → 241
      DUF4195; Domain of unknown function (DUF4195)
      cd20908
      Location:400 → 451
      SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

    3. XM_004943779.5 → XP_004943836.3  zinc finger protein 280D isoform X1

      UniProtKB/TrEMBL
      A0A1D5NX23
      Related
      ENSGALP00010034290.1, ENSGALT00010056548.1
      Conserved Domains (3) summary
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:33 → 241
      DUF4195; Domain of unknown function (DUF4195)
      cl27169
      Location:78 → 187
      ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...

    4. XM_040706849.2 → XP_040562783.1  zinc finger protein 280D isoform X7

      Conserved Domains (2) summary
      PRK03427
      Location:78 → 187
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_040706850.2 → XP_040562784.1  zinc finger protein 280D isoform X5

      Conserved Domains (2) summary
      PRK03427
      Location:56 → 165
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:348 → 369
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_413961.8 → XP_413961.6  zinc finger protein 280D isoform X2

      Conserved Domains (3) summary
      sd00017
      Location:348 → 369
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:33 → 219
      DUF4195; Domain of unknown function (DUF4195)
      cl27169
      Location:56 → 165
      ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...

    7. XM_015291869.4 → XP_015147355.2  zinc finger protein 280D isoform X6

      Conserved Domains (2) summary
      sd00017
      Location:232 → 253
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:11 → 103
      DUF4195; Domain of unknown function (DUF4195)

    8. XM_046899263.1 → XP_046755219.1  zinc finger protein 280D isoform X6

    RNA

    1. XR_006931111.1 RNA Sequence

    2. XR_212852.5 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7483914..7530213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040680769.2 → XP_040536703.1  zinc finger protein 280D isoform X3

      Conserved Domains (2) summary
      PRK03427
      Location:63 → 172
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:355 → 376
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_040680771.2 → XP_040536705.1  zinc finger protein 280D isoform X4

      Conserved Domains (4) summary
      PRK03427
      Location:78 → 187
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:33 → 241
      DUF4195; Domain of unknown function (DUF4195)
      cd20908
      Location:400 → 451
      SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

    3. XM_040680767.2 → XP_040536701.1  zinc finger protein 280D isoform X1

      Conserved Domains (2) summary
      PRK03427
      Location:78 → 187
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040680770.2 → XP_040536704.1  zinc finger protein 280D isoform X8

      Conserved Domains (2) summary
      PRK03427
      Location:78 → 187
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:370 → 391
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_040680772.2 → XP_040536706.1  zinc finger protein 280D isoform X5

      Conserved Domains (2) summary
      PRK03427
      Location:56 → 165
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:348 → 369
      ZF_C2H2; C2H2 Zn finger [structural motif]

    6. XM_040680768.2 → XP_040536702.1  zinc finger protein 280D isoform X2

      Conserved Domains (2) summary
      PRK03427
      Location:56 → 165
      PRK03427; cell division protein ZipA; Provisional
      sd00017
      Location:348 → 369
      ZF_C2H2; C2H2 Zn finger [structural motif]

    7. XM_046925227.1 → XP_046781183.1  zinc finger protein 280D isoform X6

    8. XM_046925226.1 → XP_046781182.1  zinc finger protein 280D isoform X6

    RNA

    1. XR_006935775.1 RNA Sequence

    2. XR_005853130.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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