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    STMN4 stathmin 4 [ Gallus gallus (chicken) ]

    Gene ID: 422010, updated on 17-Aug-2024

    Summary

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    Symbol
    STMN4provided by CGNC
    Full Name
    stathmin 4provided by CGNC
    Primary source
    CGNC:12435
    See related
    Ensembl:ENSGALG00010010517
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See STMN4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (105160758..105167588)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (104924523..104931353)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene dynein regulatory complex subunit 1 Neighboring gene tripartite motif containing 35 Neighboring gene angiopoietin-related protein 7-like Neighboring gene proopiomelanocortin Neighboring gene EFR3 homolog B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of microtubule polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stathmin-4
    Names
    stathmin-like 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      105160758..105167588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004935870.5 → XP_004935927.3  stathmin-4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y105
      Related
      ENSGALP00010014244.1, ENSGALT00010025088.1
      Conserved Domains (1) summary
      pfam00836
      Location:49 → 170
      Stathmin; Stathmin family

    2. XM_420017.8 → XP_420017.5  stathmin-4 isoform X3

      Conserved Domains (1) summary
      pfam00836
      Location:49 → 184
      Stathmin; Stathmin family

    3. XM_004935871.5 → XP_004935928.3  stathmin-4 isoform X2

      Conserved Domains (1) summary
      pfam00836
      Location:48 → 169
      Stathmin; Stathmin family

    4. XM_004935868.5 → XP_004935925.3  stathmin-4 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y785
      Related
      ENSGALP00010014246.1, ENSGALT00010025092.1
      Conserved Domains (1) summary
      pfam00836
      Location:48 → 183
      Stathmin; Stathmin family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      104924523..104931353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040668395.2 → XP_040524329.1  stathmin-4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y105
      Conserved Domains (1) summary
      pfam00836
      Location:49 → 170
      Stathmin; Stathmin family

    2. XM_040668397.2 → XP_040524331.1  stathmin-4 isoform X3

      Conserved Domains (1) summary
      pfam00836
      Location:49 → 184
      Stathmin; Stathmin family

    3. XM_040668396.2 → XP_040524330.1  stathmin-4 isoform X2

      Conserved Domains (1) summary
      pfam00836
      Location:48 → 169
      Stathmin; Stathmin family

    4. XM_040668398.2 → XP_040524332.1  stathmin-4 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y785
      Conserved Domains (1) summary
      pfam00836
      Location:48 → 183
      Stathmin; Stathmin family
    Nucleotide Protein Strain
    Heading Accession and Version

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