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    SLC12A1 solute carrier family 12 member 1 [ Gallus gallus (chicken) ]

    Gene ID: 415433, updated on 17-Aug-2024

    Summary

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    Symbol
    SLC12A1provided by CGNC
    Full Name
    solute carrier family 12 member 1provided by CGNC
    Primary source
    CGNC:3673
    See related
    Ensembl:ENSGALG00010018390
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC12A1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (10108262..10157397)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (9981005..10030136)

    Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene myelin expression factor 2 Neighboring gene solute carrier family 24 member 5 Neighboring gene cortexin 2 Neighboring gene uncharacterized LOC107054178 Neighboring gene uncharacterized LOC121113472 Neighboring gene deoxyuridine triphosphatase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rare independent mutations in renal salt handling genes contribute to blood pressure variation. Ji W, et al. Nat Genet, 2008 May. PMID 18391953, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium:potassium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 12 member 1
    Names
    solute carrier family 12 (sodium/potassium/chloride transporter), member 1
    solute carrier family 12 (sodium/potassium/chloride transporters), member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10108262..10157397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040706503.2 → XP_040562437.1  solute carrier family 12 member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z5P0, A0A8V0ZD43
      Related
      ENSGALP00010026448.1, ENSGALT00010044435.1
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1129
      2a30; K-Cl cotransporter

    2. XM_004943799.5 → XP_004943856.4  solute carrier family 12 member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Related
      ENSGALP00010026444.1, ENSGALT00010044431.1
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1097
      2a30; K-Cl cotransporter

    3. XM_413814.8 → XP_413814.6  solute carrier family 12 member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZL0, A0A8V0ZD43
      Related
      ENSGALP00010026441.1, ENSGALT00010044428.1

    4. XM_040706504.2 → XP_040562438.1  solute carrier family 12 member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z5P0, A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1129
      2a30; K-Cl cotransporter

    5. XM_040706505.2 → XP_040562439.1  solute carrier family 12 member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1097
      2a30; K-Cl cotransporter

    RNA

    1. XR_005862688.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9981005..10030136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040679937.2 → XP_040535871.1  solute carrier family 12 member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1129
      2a30; K-Cl cotransporter

    2. XM_040679940.2 → XP_040535874.1  solute carrier family 12 member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1097
      2a30; K-Cl cotransporter

    3. XM_040679939.2 → XP_040535873.1  solute carrier family 12 member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1097
      2a30; K-Cl cotransporter

    4. XM_040679938.2 → XP_040535872.1  solute carrier family 12 member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1129
      2a30; K-Cl cotransporter

    5. XM_040679941.2 → XP_040535875.1  solute carrier family 12 member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZD43
      Conserved Domains (1) summary
      TIGR00930
      Location:101 → 1097
      2a30; K-Cl cotransporter

    RNA

    1. XR_005852926.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials