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    ZNF143 zinc finger protein 143 [ Gallus gallus (chicken) ]

    Gene ID: 428845, updated on 3-Dec-2024

    Summary

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    Symbol
    ZNF143provided by CGNC
    Full Name
    zinc finger protein 143provided by CGNC
    Primary source
    CGNC:4317
    See related
    Ensembl:ENSGALG00010021160
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF143 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (8996936..9033990, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (8965876..9002934, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053375 Neighboring gene switching B cell complex subunit SWAP70 Neighboring gene WEE1 G2 checkpoint kinase Neighboring gene small nucleolar RNA SNORA23 Neighboring gene importin 7 Neighboring gene uncharacterized LOC121110989

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in central nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 143
    Names
    zinc finger protein 143 (clone pHZ-1)
    XP_015141947.1
    XP_015141951.1
    XP_015141952.1
    XP_040529523.1
    XP_040529524.1
    XP_040529526.1
    XP_040529527.1
    XP_040529528.1
    XP_040529530.1
    XP_040529532.1
    XP_040529534.1
    XP_040557141.1
    XP_040557142.1
    XP_040557143.1
    XP_040557144.1
    XP_040557145.1
    XP_046775337.1
    XP_046775338.1
    XP_046775339.1
    XP_046775341.1
    XP_046775342.1
    XP_046775343.1
    XP_046775344.1
    XP_046775345.1
    XP_046798234.1
    XP_046798235.1
    XP_046798236.1
    XP_426401.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8996936..9033990 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040701211.2 → XP_040557145.1  zinc finger protein 143 isoform X6

      UniProtKB/TrEMBL
      A0A3Q2UGN6, A0A8V0ZGN6
      Related
      ENSGALP00010030457.1, ENSGALT00010051266.1
      Conserved Domains (2) summary
      COG5048
      Location:222 → 395
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:210 → 232
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015286466.4 → XP_015141952.1  zinc finger protein 143 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:246 → 419
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:234 → 256
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_015286461.4 → XP_015141947.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Related
      ENSGALP00010030464.1, ENSGALT00010051273.1
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_015286465.4 → XP_015141951.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Related
      ENSGALP00010030447.1, ENSGALT00010051256.1
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_046942280.1 → XP_046798236.1  zinc finger protein 143 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZGN6

    6. XM_040701209.1 → XP_040557143.1  zinc finger protein 143 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:261 → 434
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:249 → 271
      ZF_C2H2; C2H2 Zn finger [structural motif]

    7. XM_040701207.1 → XP_040557141.1  zinc finger protein 143 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZGN6, A0A8V0ZI46
      Related
      ENSGALP00010030460.1, ENSGALT00010051270.1
      Conserved Domains (2) summary
      COG5048
      Location:265 → 438
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_040701210.2 → XP_040557144.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Related
      ENSGALP00010030452.1, ENSGALT00010051261.1
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    9. XM_046942278.1 → XP_046798234.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    10. XM_040701208.2 → XP_040557142.1  zinc finger protein 143 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZGN6, A0A8V0ZI46
      Conserved Domains (2) summary
      COG5048
      Location:265 → 438
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]

    11. XM_426401.8 → XP_426401.3  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    12. XM_046942279.1 → XP_046798235.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8965876..9002934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673600.2 → XP_040529534.1  zinc finger protein 143 isoform X6

      UniProtKB/TrEMBL
      A0A3Q2UGN6, A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:222 → 395
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:210 → 232
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_040673598.2 → XP_040529532.1  zinc finger protein 143 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:246 → 419
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:234 → 256
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_040673593.2 → XP_040529527.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040673594.2 → XP_040529528.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_046919389.1 → XP_046775345.1  zinc finger protein 143 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZGN6

    6. XM_040673592.1 → XP_040529526.1  zinc finger protein 143 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:261 → 434
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:249 → 271
      ZF_C2H2; C2H2 Zn finger [structural motif]

    7. XM_040673589.1 → XP_040529523.1  zinc finger protein 143 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:265 → 438
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_046919383.1 → XP_046775339.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    9. XM_046919382.1 → XP_046775338.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    10. XM_046919381.1 → XP_046775337.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    11. XM_046919386.1 → XP_046775342.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    12. XM_040673590.2 → XP_040529524.1  zinc finger protein 143 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZGN6
      Conserved Domains (2) summary
      COG5048
      Location:265 → 438
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]

    13. XM_046919385.1 → XP_046775341.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    14. XM_046919388.1 → XP_046775344.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8

    15. XM_040673596.2 → XP_040529530.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
      Conserved Domains (2) summary
      COG5048
      Location:250 → 423
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:238 → 260
      ZF_C2H2; C2H2 Zn finger [structural motif]

    16. XM_046919387.1 → XP_046775343.1  zinc finger protein 143 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZGN6, E1C5B8
    Nucleotide Protein Strain
    Heading Accession and Version

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