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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001177313.2 → NP_001170784.1 origin recognition complex subunit 4 isoform 2
See identical proteins and their annotated locations for NP_001170784.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks multiple 3' exons, but has an alternate 3' exon, as compared to variant 1. The resulting isoform (2) is shorter and has a different C-terminus, as compared to isoform 1. Variants 2, 11, 12, and 13 all encode the same isoform (2).
- Source sequence(s)
-
AL732317, AL845521
- Consensus CDS
-
CCDS50582.1
- UniProtKB/TrEMBL
-
Q9CZF7
- Related
- ENSMUSP00000088497.4, ENSMUST00000090976.10
- Conserved Domains (2) summary
-
- PRK00411
Location:46 → 130
- cdc6; ORC1-type DNA replication protein
- pfam13191
Location:35 → 82
- AAA_16; AAA ATPase domain
-
NM_001355296.2 → NP_001342225.1 origin recognition complex subunit 4 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 4, 7, and 8 all encode the same isoform (1).
- Source sequence(s)
-
AL732317, AL845521
- Consensus CDS
-
CCDS16022.1
- UniProtKB/Swiss-Prot
- O88708, Q91V62, Q9QYX1
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
- Conserved Domains (2) summary
-
- COG1474
Location:41 → 223
- CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
- pfam14629
Location:225 → 412
- ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus
-
NM_001421264.1 → NP_001408193.1 origin recognition complex subunit 4 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/Swiss-Prot
- O88708, Q91V62, Q9QYX1
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
-
NM_001421265.1 → NP_001408194.1 origin recognition complex subunit 4 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/Swiss-Prot
- O88708, Q91V62, Q9QYX1
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
-
NM_001421266.1 → NP_001408195.1 origin recognition complex subunit 4 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
-
NM_001421267.1 → NP_001408196.1 origin recognition complex subunit 4 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/TrEMBL
-
Q8BTB0
- Related
- ENSMUSP00000119274.2, ENSMUST00000142851.8
-
NM_001421268.1 → NP_001408197.1 origin recognition complex subunit 4 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/TrEMBL
-
Q9CZF7
-
NM_001421269.1 → NP_001408198.1 origin recognition complex subunit 4 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/TrEMBL
-
Q9CZF7
-
NM_001421270.1 → NP_001408199.1 origin recognition complex subunit 4 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- UniProtKB/TrEMBL
-
Q9CZF7
-
NM_011958.5 → NP_036088.3 origin recognition complex subunit 4 isoform 1
See identical proteins and their annotated locations for NP_036088.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1, 4, 7, and 8 all encode the same isoform (1).
- Source sequence(s)
-
AL732317, AL845521
- Consensus CDS
-
CCDS16022.1
- UniProtKB/Swiss-Prot
- O88708, Q91V62, Q9QYX1
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
- Related
- ENSMUSP00000028098.5, ENSMUST00000028098.11
- Conserved Domains (2) summary
-
- COG1474
Location:41 → 223
- CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
- pfam14629
Location:225 → 412
- ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus
RNA
-
NR_033442.3 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an internal segment in the 3' CDS, as compared to variant 1. The transcript is a nonsense-mediated mRNA decay candidate and is probably not making a protein.
- Source sequence(s)
-
AL732317, AL845521
-
NR_149355.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
-
NR_149356.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
-
NR_185286.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
-
NR_185287.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
- Related
-
ENSMUST00000154784.8
-
NR_185288.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
-
NR_185289.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL732317, AL845521
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
48792836..48840287 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006498066.4 → XP_006498129.1 origin recognition complex subunit 4 isoform X2
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
- Conserved Domains (2) summary
-
- COG1474
Location:41 → 190
- CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
- pfam14629
Location:195 → 354
- ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus
-
XM_030251581.1 → XP_030107441.1 origin recognition complex subunit 4 isoform X2
- UniProtKB/TrEMBL
- Q8BN98, Q8C693
- Conserved Domains (2) summary
-
- COG1474
Location:41 → 190
- CDC6; Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]
- pfam14629
Location:195 → 354
- ORC4_C; Origin recognition complex (ORC) subunit 4 C-terminus